RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 CLIP4Q8N3C7 705 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 FAM109AQ8N4B1 249 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 AFAP1L2Q8N4X5 818 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 FBXL6Q8N531 539 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 C2orf69Q8N8R5 385 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 GLIS1Q8NBF1 620 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 OR6F1Q8NGZ6 308 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 LHFPL5Q8TAF8 219 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC35B2Q8TB61 432 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 PHF10Q8WUB8 498 aaKnown RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 PDCD6IPQ8WUM4 868 aaKnown RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 CAPSLQ8WWF8 208 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 DDX1Q92499 740 aaKnown RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 HAS1Q92839 578 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 VPS33AQ96AX1 596 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 ELMO3Q96BJ8 720 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 METTL2AQ96IZ6 378 aaKnown RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 ACAP3Q96P50 834 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 PSMG3-AS1Q96PY0 264 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 TWNKQ96RR1 684 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 SERPINI1Q99574 410 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 TMEM79Q9BSE2 394 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 SPON2Q9BUD6 331 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 TRAF4Q9BUZ4 470 aaPredicted RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 NT5C1AQ9BXI3 368 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 CALN1Q9BXU9 219 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 TGIF2Q9GZN2 237 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 WNT10AQ9GZT5 417 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 MKRN2Q9H000 416 aaKnown RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 KCNN2Q9H2S1 579 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 COPS7BQ9H9Q2 264 aaPredicted RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 FBRSQ9HAH7 460 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 PLAC1Q9HBJ0 212 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 PCDH9Q9HC56 1237 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 ANKHQ9HCJ1 492 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 HMG20AQ9NP66 347 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 C1GALT1Q9NS00 363 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 UBP1Q9NZI7 540 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 APEX2Q9UBZ4 518 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 PCSK1NQ9UHG2 260 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 MAD2L2Q9UI95 211 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 SERPINB13Q9UIV8 391 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 NIP7Q9Y221 180 aaKnown RBP eCLIP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 WBP11Q9Y2W2 641 aaKnown RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 NAALAD2Q9Y3Q0 740 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 SPEF1Q9Y4P9 236 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 RIPK3Q9Y572 518 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 PCDHGB3Q9Y5G1 929 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 ST14Q9Y5Y6 855 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 GAKO14976 1311 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 TNS3Q68CZ2 1445 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 NHSL1Q5SYE7 1610 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 SCN11AQ9UI33 1791 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 RICTORQ6R327 1708 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 UBE4BO95155 1302 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 A0A0G2JMP0 313 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 A0A0X1KG70 313 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 FAM95CA0A1B0GW59 222 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 PRAMEF27A3QJZ7 478 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 SNTNA6NMZ2 147 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 C9IYK1 514 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 EIF3DO15371 548 aaKnown RBP eCLIP5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 MTSS1O43312 755 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC37A4O43826 429 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 ZBTB14O43829 449 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 ZNF623O75123 536 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 UGT2B11O75310 529 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 BCAS1O75363 584 aaPredicted RBP5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 PROSCO94903 275 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 SLITRK5O94991 958 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 NDST3O95803 873 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 ITGAVP06756 1048 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 PLA2G4BP0C869 781 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 MCF2P10911 925 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 FGF3P11487 239 aaPredicted RBP5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 KRT3P12035 628 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 ITIH1P19827 911 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 ME2P23368 584 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 PRKCHP24723 683 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 GRK2P25098 689 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 CD40LGP29965 261 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 RRM2P31350 389 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 DDOSTP39656 456 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC26A3P40879 764 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 EIF2DP41214 584 aaKnown RBP5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 DPP6P42658 865 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 OR3A3P47888 321 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 NDST1P52848 882 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 PPP5CP53041 499 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 DSTNP60981 165 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 ADARB1P78563 741 aaKnown RBP5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 MRPS22P82650 360 aaKnown RBP5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 RHDQ02161 417 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 FCHO2Q0JRZ9 810 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 TRAF2Q12933 501 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 PDE1CQ14123 709 aaPredicted RBP5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 TAF5Q15542 800 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 CHI3L2Q15782 390 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 VPS72Q15906 364 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms