RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CCDC117Q8IWD4 279 aaPredicted RBP19.89■□□□□ 0.77
SSH1-209ENST00000551165 DCLK2Q8N568 766 aa19.89■□□□□ 0.77
SSH1-209ENST00000551165 C12orf76Q8N812 135 aaPredicted RBP19.89■□□□□ 0.77
SSH1-209ENST00000551165 MCMBPQ9BTE3 642 aa19.89■□□□□ 0.77
SSH1-209ENST00000551165 GGT7Q9UJ14 662 aa19.89■□□□□ 0.77
SSH1-209ENST00000551165 FCF1Q9Y324 198 aaKnown RBP19.89■□□□□ 0.77
SSH1-209ENST00000551165 TM9SF1O15321 606 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 SERPINF2P08697 491 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 AVPR1AP37288 418 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 MPP1Q00013 466 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 PDE1CQ14123 709 aaPredicted RBP19.88■□□□□ 0.77
SSH1-209ENST00000551165 PTPRRQ15256 657 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 DLG2Q15700 870 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 GRTP1Q5TC63 336 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 CGB2Q6NT52 195 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 SPNS2Q8IVW8 549 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 PTPRN2Q92932 1015 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 IFT43Q96FT9 208 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 SEC16BQ96JE7 1060 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 TRIB3Q96RU7 358 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 PCDHGC4Q9Y5F7 938 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 CCDC195A0A1B0GUA6 201 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 INSIG1O15503 277 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 PDHA1P08559 390 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 CD70P32970 193 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 PDE1BQ01064 536 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 PDK4Q16654 411 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 PDPK2PQ6A1A2 396 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 OR13J1Q8NGT2 312 aa19.88■□□□□ 0.77
SSH1-209ENST00000551165 ZNF707Q96C28 371 aaPredicted RBP19.88■□□□□ 0.77
SSH1-209ENST00000551165 HELZP42694 1942 aaKnown RBP19.88■□□□□ 0.77
SSH1-209ENST00000551165 TYW5A2RUC4 315 aaKnown RBP19.87■□□□□ 0.77
SSH1-209ENST00000551165 DHRS4L1P0CG22 281 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 CNTFP26441 200 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 ARSDP51689 593 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 LIMK2P53671 638 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 LMAN2Q12907 356 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 SEPT7Q16181 437 aaKnown RBP19.87■□□□□ 0.77
SSH1-209ENST00000551165 PRSS36Q5K4E3 855 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 TMEM25Q86YD3 366 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 CPXM2Q8N436 756 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 FEM1CQ96JP0 617 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 LINC00597Q9H2U6 94 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 TASP1Q9H6P5 420 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 MRM3Q9HC36 420 aaKnown RBP19.87■□□□□ 0.77
SSH1-209ENST00000551165 PLLPQ9Y342 182 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 ARL5AQ9Y689 179 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 PRRC2BQ5JSZ5 2229 aaKnown RBP19.87■□□□□ 0.77
SSH1-209ENST00000551165 AURKAO14965 403 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 SMAD6O43541 496 aaKnown RBP19.87■□□□□ 0.77
SSH1-209ENST00000551165 LDB2O43679 373 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 PRLP01236 227 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 AHSGP02765 367 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 RFTN1Q14699 578 aaPredicted RBP19.87■□□□□ 0.77
SSH1-209ENST00000551165 ATXN7L2Q5T6C5 722 aaPredicted RBP19.87■□□□□ 0.77
SSH1-209ENST00000551165 TSTD2Q5T7W7 516 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 FYB2Q5VWT5 728 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 C16orf46Q6P387 395 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 ZNF783Q6ZMS7 281 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 PIGWQ7Z7B1 504 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 BBS5Q8N3I7 341 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 BLOC1S5Q8TDH9 187 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 MECRQ9BV79 373 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 SCUBE2Q9NQ36 999 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 LHX3Q9UBR4 397 aa19.87■□□□□ 0.77
SSH1-209ENST00000551165 INTS6Q9UL03 887 aaKnown RBP19.87■□□□□ 0.77
SSH1-209ENST00000551165 XIRP2A4UGR9 3374 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 HEATR9A2RTY3 570 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 ERVK-21P61565 698 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 ARMC2Q8NEN0 867 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 PTCD2Q8WV60 388 aaKnown RBP19.86■□□□□ 0.77
SSH1-209ENST00000551165 ZNF75CPQ92670 426 aaPredicted RBP19.86■□□□□ 0.77
SSH1-209ENST00000551165 TDP1Q9NUW8 608 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 ZNF358Q9NW07 568 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 A0A0U1RQS6 177 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 MROH6A6NGR9 719 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 OR51F1A6NGY5 319 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 CEBPBP17676 345 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 IRX4P78413 519 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 TMPRSS15P98073 1019 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 GRM3Q14832 879 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 MPPE1Q53F39 396 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 ITFG1Q8TB96 612 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 VPS39Q96JC1 886 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 SNX15Q9NRS6 342 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 ZNF510Q9Y2H8 683 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 SPO11Q9Y5K1 396 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 ATG2AQ2TAZ0 1938 aa19.86■□□□□ 0.77
SSH1-209ENST00000551165 ANKRD65E5RJM6 399 aa19.85■□□□□ 0.77
SSH1-209ENST00000551165 EBAG9O00559 213 aa19.85■□□□□ 0.77
SSH1-209ENST00000551165 SPRP35270 261 aaPredicted RBP19.85■□□□□ 0.77
SSH1-209ENST00000551165 SLC1A2P43004 574 aa19.85■□□□□ 0.77
SSH1-209ENST00000551165 GLIPR1L2Q4G1C9 344 aa19.85■□□□□ 0.77
SSH1-209ENST00000551165 ZNF789Q5FWF6 425 aa19.85■□□□□ 0.77
SSH1-209ENST00000551165 GKAP1Q5VSY0 366 aaPredicted RBP19.85■□□□□ 0.77
SSH1-209ENST00000551165 MFSD6LQ8IWD5 586 aa19.85■□□□□ 0.77
SSH1-209ENST00000551165 OR6K2Q8NGY2 324 aa19.85■□□□□ 0.77
SSH1-209ENST00000551165 THOC1Q96FV9 657 aaKnown RBP19.85■□□□□ 0.77
SSH1-209ENST00000551165 RANBP9Q96S59 729 aa19.85■□□□□ 0.77
SSH1-209ENST00000551165 PRKD2Q9BZL6 878 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms