RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 NNMTP40261 264 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 GABRB2P47870 512 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 PTDSS1P48651 473 aaKnown RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 CASP4P49662 377 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 WNT7BP56706 349 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 MC1RQ01726 317 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 TEFQ10587 303 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 SF3A3Q12874 501 aaKnown RBP eCLIP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 PMS2P3Q13401 168 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 CAPRIN1Q14444 709 aaKnown RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 MTFR1Q15390 333 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 SPA17Q15506 151 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 SMAD2Q15796 467 aaKnown RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 TIGD6Q17RP2 521 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 FAM98BQ52LJ0 330 aaKnown RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 GPAT3Q53EU6 434 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 CDKL4Q5MAI5 379 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 MPP7Q5T2T1 576 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 KRT40Q6A162 431 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 DPY19L2P1Q6NXN4 242 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 APOA5Q6Q788 366 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 SLC36A4Q6YBV0 504 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 CHST3Q7LGC8 479 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 SZRD1Q7Z422 152 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 ANKLE2Q86XL3 938 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 MIB1Q86YT6 1006 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 SRBD1Q8N5C6 995 aaKnown RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 GLIS1Q8NBF1 620 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 ZNF248Q8NDW4 579 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 GSTCDQ8NEC7 633 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 CMASQ8NFW8 434 aaPredicted RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 SLC13A3Q8WWT9 602 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 CPT1BQ92523 772 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 MTFMTQ96DP5 389 aaKnown RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 FAM89AQ96GI7 184 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 MS4A14Q96JA4 679 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 MAGED4Q96JG8 741 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 FAM71F1Q96KD3 344 aaPredicted RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 NSMCE2Q96MF7 247 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 P2RX7Q99572 595 aaKnown RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 HEPHQ9BQS7 1158 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 DSCC1Q9BVC3 393 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 TLR10Q9BXR5 811 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 PHAXQ9H814 394 aaKnown RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 SLC38A10Q9HBR0 1119 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 TRIM39Q9HCM9 518 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 ZDHHC18Q9NUE0 388 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 ZSCAN32Q9NX65 697 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 LRFN1Q9P244 771 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 HSFX1Q9UBD0 423 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 RWDD2AQ9UIY3 292 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 GGA1Q9UJY5 639 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 RNF24Q9Y225 148 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 PCDHA3Q9Y5H8 950 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 MAP2P11137 1827 aaKnown RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 ARAP3Q8WWN8 1544 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 SPATA31A3Q5VYP0 1347 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 CLTCQ00610 1675 aaKnown RBP6.52□□□□□ -1.37
LINC02388-201ENST00000550678 A0A0J9YVX5 310 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 KLF18A0A0U1RQI7 1052 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 A0A0U1RQV5 110 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 A0A1W2PN81 502 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 SIGLEC16A6NMB1 481 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 LGALS16A8MUM7 142 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 H0Y858 1186 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 MATN2O00339 956 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 ACKR2O00590 384 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 ZNF263O14978 683 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 RAD51CO43502 376 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 GMFGO60234 142 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 SUN1O94901 812 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 SPDEFO95238 335 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 DLGAP3O95886 979 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 PNPP00491 289 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 SHBGP04278 402 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 CSH1P0DML2 217 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 CSH2P0DML3 217 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 KRT5P13647 590 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 BPIP17213 487 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 NR2F2P24468 414 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 CHRNA7P36544 502 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 MMP13P45452 471 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 EIF3BP55884 814 aaKnown RBP6.52□□□□□ -1.37
LINC02388-201ENST00000550678 ERVK-9P63128 1117 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 TNNC1P63316 161 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 GRIN1Q05586 938 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 WASHC2DQ5SRD0 308 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 ARMC6Q6NXE6 501 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 IDO2Q6ZQW0 420 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 RTL4Q6ZR62 310 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 TPGS1Q6ZTW0 290 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 UTS2BQ765I0 119 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 TRMT10CQ7L0Y3 403 aaKnown RBP6.52□□□□□ -1.37
LINC02388-201ENST00000550678 OTOAQ7RTW8 1153 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 TTC7BQ86TV6 843 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 NME9Q86XW9 330 aa6.52□□□□□ -1.37
LINC02388-201ENST00000550678 SMYD4Q8IYR2 804 aaPredicted RBP6.52□□□□□ -1.37
LINC02388-201ENST00000550678 ZCCHC7Q8N3Z6 543 aaKnown RBP6.52□□□□□ -1.37
LINC02388-201ENST00000550678 SLC17A8Q8NDX2 589 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms