RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 HMGA1P17096 107 aaKnown RBP5.98□□□□□ -1.45
SCAF11-213ENST00000550629 PTPN2P17706 415 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 DDX6P26196 483 aaKnown RBP eCLIP5.98□□□□□ -1.45
SCAF11-213ENST00000550629 YWHAQP27348 245 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 APEX1P27695 318 aaKnown RBP5.98□□□□□ -1.45
SCAF11-213ENST00000550629 CDC25CP30307 473 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 FLT3P36888 993 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 FNTBP49356 437 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 TUBP50607 506 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 TKTL1P51854 596 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 KRT83P78385 493 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 ALDH6A1Q02252 535 aaKnown RBP5.98□□□□□ -1.45
SCAF11-213ENST00000550629 GOLGA8FQ08AF8 430 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 GOLGA8DPQ0D2H9 430 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 ADIGQ0VDE8 80 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 PTP4A2Q12974 167 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 ZNF268Q14587 947 aaPredicted RBP5.98□□□□□ -1.45
SCAF11-213ENST00000550629 CDSNQ15517 529 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 TCEA2Q15560 299 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 TAF12Q16514 161 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 HS1BP3Q53T59 392 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 EFHC1Q5JVL4 640 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 CYP4A22Q5TCH4 519 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 GRAMD4Q6IC98 578 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 CES5AQ6NT32 575 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 TCTN3Q6NUS6 607 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 ZNF585AQ6P3V2 769 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 ALKBH5Q6P6C2 394 aaKnown RBP5.98□□□□□ -1.45
SCAF11-213ENST00000550629 MMS22LQ6ZRQ5 1243 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 SLC26A9Q7LBE3 791 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 SPRED1Q7Z699 444 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 DNAJB7Q7Z6W7 309 aaPredicted RBP5.98□□□□□ -1.45
SCAF11-213ENST00000550629 GPR149Q86SP6 731 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 TADA2BQ86TJ2 420 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 MCOLN2Q8IZK6 566 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 C3orf20Q8ND61 904 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 Q8TCH9 128 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 GOLGA1Q92805 767 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 MCRS1Q96EZ8 462 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 MSLNLQ96KJ4 702 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 RIPOR3Q96MK2 946 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 NECTIN4Q96NY8 510 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 CDK5RAP1Q96SZ6 601 aaKnown RBP5.98□□□□□ -1.45
SCAF11-213ENST00000550629 KLC2Q9H0B6 622 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 MRPL47Q9HD33 250 aaKnown RBP5.98□□□□□ -1.45
SCAF11-213ENST00000550629 ACSS2Q9NR19 701 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 ASAH2Q9NR71 780 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 SEPT11Q9NVA2 429 aaKnown RBP5.98□□□□□ -1.45
SCAF11-213ENST00000550629 PARVAQ9NVD7 372 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 ADAM22Q9P0K1 906 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 B4GALT6Q9UBX8 382 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 CYTH4Q9UIA0 394 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 COG5Q9UP83 839 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 TSC22D4Q9Y3Q8 395 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 NR2E1Q9Y466 385 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 EPN1Q9Y6I3 576 aaPredicted RBP5.98□□□□□ -1.45
SCAF11-213ENST00000550629 SCINQ9Y6U3 715 aa5.98□□□□□ -1.45
SCAF11-213ENST00000550629 PATJQ8NI35 1801 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-213ENST00000550629 ZNF840PA6NDX5 716 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 BTNL10A8MVZ5 291 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 MATN2O00339 956 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 CCL16O15467 120 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 PAPSS1O43252 624 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-213ENST00000550629 HSF2BPO75031 334 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 RFPL2O75678 378 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 CSPG5O95196 566 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 ERBB2P04626 1255 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 H2AFZP0C0S5 128 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 MTHFRP42898 656 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 GPR15P49685 360 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 RGS7P49802 495 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 DAOAP59103 153 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 YWHAZP63104 245 aaKnown RBP5.97□□□□□ -1.45
SCAF11-213ENST00000550629 GPC5P78333 572 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 MRPS5P82675 430 aaKnown RBP5.97□□□□□ -1.45
SCAF11-213ENST00000550629 CCZ1BP86790 482 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 CCZ1P86791 482 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-213ENST00000550629 SLC6A3Q01959 620 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 GFPT1Q06210 699 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-213ENST00000550629 TAF10Q12962 218 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 PCOLCEQ15113 449 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 PTPN20Q4JDL3 420 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 ATAT1Q5SQI0 421 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 CCDC122Q5T0U0 273 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 PLEKHA7Q6IQ23 1121 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 KLHDC10Q6PID8 442 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 SYCE2Q6PIF2 218 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 OLFML1Q6UWY5 402 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 RAD9BQ6WBX8 426 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 ZNF662Q6ZS27 426 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 USP51Q70EK9 711 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 H2AFVQ71UI9 128 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 PDZD4Q76G19 769 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-213ENST00000550629 Q7L0L9 218 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 GPRIN1Q7Z2K8 1008 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 XYLT1Q86Y38 959 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 TMC8Q8IU68 726 aa5.97□□□□□ -1.45
SCAF11-213ENST00000550629 BCL6BQ8N143 479 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-213ENST00000550629 KIAA1958Q8N8K9 716 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms