RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 ITIH2P19823 946 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 MPLP40238 635 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 ABL2P42684 1182 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 AP1S1P61966 158 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 IFI35P80217 286 aaPredicted RBP22.77■■□□□ 1.24
BRF1-216ENST00000550208 BCL2L1Q07817 233 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 ZBTB17Q13105 803 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 PRKD1Q15139 912 aaPredicted RBP22.77■■□□□ 1.24
BRF1-216ENST00000550208 WDR45BQ5MNZ6 344 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 TTC7BQ86TV6 843 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 SYT12Q8IV01 421 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.77■■□□□ 1.24
BRF1-216ENST00000550208 CNTD1Q8N815 330 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 HCAR2Q8TDS4 363 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 TFB1MQ8WVM0 346 aaKnown RBP22.77■■□□□ 1.24
BRF1-216ENST00000550208 DNASE2BQ8WZ79 361 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 SEMA3CQ99985 751 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 CEP41Q9BYV8 373 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 ATP13A3Q9H7F0 1226 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 PARD6AQ9NPB6 346 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 SEPT10Q9P0V9 454 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 EIF2B4Q9UI10 523 aaKnown RBP22.77■■□□□ 1.24
BRF1-216ENST00000550208 ATP8A1Q9Y2Q0 1164 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 FADS3Q9Y5Q0 445 aa22.77■■□□□ 1.24
BRF1-216ENST00000550208 OTOGLQ3ZCN5 2332 aa22.76■■□□□ 1.23
BRF1-216ENST00000550208 NEBLO76041 1014 aa22.76■■□□□ 1.23
BRF1-216ENST00000550208 TGM1P22735 817 aa22.76■■□□□ 1.23
BRF1-216ENST00000550208 PPP2CBP62714 309 aa22.76■■□□□ 1.23
BRF1-216ENST00000550208 PPP2CAP67775 309 aa22.76■■□□□ 1.23
BRF1-216ENST00000550208 OTUD4Q01804 1114 aaKnown RBP22.76■■□□□ 1.23
BRF1-216ENST00000550208 DSC2Q02487 901 aa22.76■■□□□ 1.23
BRF1-216ENST00000550208 IHHQ14623 411 aa22.76■■□□□ 1.23
BRF1-216ENST00000550208 NOMO1Q15155 1222 aa22.76■■□□□ 1.23
BRF1-216ENST00000550208 PLA2G2CQ5R387 149 aa22.76■■□□□ 1.23
BRF1-216ENST00000550208 ZSWIM9Q86XI8 627 aa22.76■■□□□ 1.23
BRF1-216ENST00000550208 ACTL9Q8TC94 416 aa22.76■■□□□ 1.23
BRF1-216ENST00000550208 SNX19Q92543 992 aa22.76■■□□□ 1.23
BRF1-216ENST00000550208 FAM118BQ9BPY3 351 aa22.76■■□□□ 1.23
BRF1-216ENST00000550208 MIR1-1HGQ9H1L0 117 aa22.76■■□□□ 1.23
BRF1-216ENST00000550208 C10orf88Q9H8K7 445 aa22.76■■□□□ 1.23
BRF1-216ENST00000550208 EBF2Q9HAK2 575 aa22.76■■□□□ 1.23
BRF1-216ENST00000550208 AMACRQ9UHK6 382 aa22.76■■□□□ 1.23
BRF1-216ENST00000550208 PCDHGC4Q9Y5F7 938 aa22.76■■□□□ 1.23
BRF1-216ENST00000550208 TNRC6BQ9UPQ9 1833 aaKnown RBP22.75■■□□□ 1.23
BRF1-216ENST00000550208 DMDP11532 3685 aa22.75■■□□□ 1.23
BRF1-216ENST00000550208 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.75■■□□□ 1.23
BRF1-216ENST00000550208 TRAFD1O14545 582 aaPredicted RBP22.75■■□□□ 1.23
BRF1-216ENST00000550208 RNGTTO60942 597 aaKnown RBP22.75■■□□□ 1.23
BRF1-216ENST00000550208 SERPINA4P29622 427 aa22.75■■□□□ 1.23
BRF1-216ENST00000550208 MAPK8P45983 427 aa22.75■■□□□ 1.23
BRF1-216ENST00000550208 CCR5P51681 352 aa22.75■■□□□ 1.23
BRF1-216ENST00000550208 NIPAL4Q0D2K0 466 aa22.75■■□□□ 1.23
BRF1-216ENST00000550208 LRRC73Q5JTD7 316 aa22.75■■□□□ 1.23
BRF1-216ENST00000550208 ARRDC2Q8TBH0 407 aa22.75■■□□□ 1.23
BRF1-216ENST00000550208 ORAI3Q9BRQ5 295 aa22.75■■□□□ 1.23
BRF1-216ENST00000550208 TLR10Q9BXR5 811 aa22.75■■□□□ 1.23
BRF1-216ENST00000550208 POLR1EQ9GZS1 481 aaKnown RBP22.75■■□□□ 1.23
BRF1-216ENST00000550208 PREBQ9HCU5 417 aa22.75■■□□□ 1.23
BRF1-216ENST00000550208 SEMA4GQ9NTN9 838 aa22.75■■□□□ 1.23
BRF1-216ENST00000550208 TTLL3Q9Y4R7 772 aa22.75■■□□□ 1.23
BRF1-216ENST00000550208 SLCO1B1Q9Y6L6 691 aa22.75■■□□□ 1.23
BRF1-216ENST00000550208 RALGAPA1Q6GYQ0 2036 aa22.75■■□□□ 1.23
BRF1-216ENST00000550208 MYO15AQ9UKN7 3530 aa22.75■■□□□ 1.23
BRF1-216ENST00000550208 TCRBV7S2A1N4TA0A589 114 aa22.74■■□□□ 1.23
BRF1-216ENST00000550208 TSPAN11A1L157 253 aa22.74■■□□□ 1.23
BRF1-216ENST00000550208 USP27XA6NNY8 438 aa22.74■■□□□ 1.23
BRF1-216ENST00000550208 PATE3B3GLJ2 98 aa22.74■■□□□ 1.23
BRF1-216ENST00000550208 H7C0C1 242 aa22.74■■□□□ 1.23
BRF1-216ENST00000550208 PCDH8O95206 1070 aa22.74■■□□□ 1.23
BRF1-216ENST00000550208 MAT2AP31153 395 aaKnown RBP22.74■■□□□ 1.23
BRF1-216ENST00000550208 ATP5OP48047 213 aa22.74■■□□□ 1.23
BRF1-216ENST00000550208 XRCC4Q13426 336 aa22.74■■□□□ 1.23
BRF1-216ENST00000550208 RALGPS1Q5JS13 557 aa22.74■■□□□ 1.23
BRF1-216ENST00000550208 PEAR1Q5VY43 1037 aaPredicted RBP22.74■■□□□ 1.23
BRF1-216ENST00000550208 C1orf216Q8TAB5 229 aa22.74■■□□□ 1.23
BRF1-216ENST00000550208 RAB7BQ96AH8 199 aa22.74■■□□□ 1.23
BRF1-216ENST00000550208 AGAP3Q96P47 875 aa22.74■■□□□ 1.23
BRF1-216ENST00000550208 VPS45Q9NRW7 570 aa22.74■■□□□ 1.23
BRF1-216ENST00000550208 GGT7Q9UJ14 662 aa22.74■■□□□ 1.23
BRF1-216ENST00000550208 ITM2BQ9Y287 266 aa22.74■■□□□ 1.23
BRF1-216ENST00000550208 EP300Q09472 2414 aaPredicted RBP22.73■■□□□ 1.23
BRF1-216ENST00000550208 A0A1W2PQU0 124 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 HACD1B0YJ81 288 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 KCNK3O14649 394 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 SPINT1O43278 529 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 AP1G1O43747 822 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 PRKCGP05129 697 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 ZNF806P0C7X5 589 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 CES1P23141 567 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 PTPN3P26045 913 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 CD27P26842 260 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 EIF3EP60228 445 aaKnown RBP22.73■■□□□ 1.23
BRF1-216ENST00000550208 TRAF2Q12933 501 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 KLF1Q13351 362 aaPredicted RBP22.73■■□□□ 1.23
BRF1-216ENST00000550208 CSRP2Q16527 193 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 UGP2Q16851 508 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 TEX44Q53QW1 395 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 ZNF569Q5MCW4 686 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 CFAP58Q5T655 872 aa22.73■■□□□ 1.23
BRF1-216ENST00000550208 ALG1LQ6GMV1 187 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms