RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 GOLPH3Q9H4A6 298 aa9.9□□□□□ -0.82
HDAC7-229ENST00000549883 SLC32A1Q9H598 525 aa9.9□□□□□ -0.82
HDAC7-229ENST00000549883 SP110Q9HB58 689 aa9.9□□□□□ -0.82
HDAC7-229ENST00000549883 ZNHIT6Q9NWK9 470 aaKnown RBP9.9□□□□□ -0.82
HDAC7-229ENST00000549883 DMTF1Q9Y222 760 aa9.9□□□□□ -0.82
HDAC7-229ENST00000549883 PRAMEF26H0Y7S4 382 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 AP1G1O43747 822 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 HYAL3O43820 417 aaPredicted RBP9.89□□□□□ -0.83
HDAC7-229ENST00000549883 MFSD11O43934 449 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 MAFKO60675 156 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 ATXN1LP0C7T5 689 aaKnown RBP9.89□□□□□ -0.83
HDAC7-229ENST00000549883 CCT8P50990 548 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 MAXP61244 160 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 IL10RBQ08334 325 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 SLC10A2Q12908 348 aaPredicted RBP9.89□□□□□ -0.83
HDAC7-229ENST00000549883 IHHQ14623 411 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 STAT4Q14765 748 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 TSR1Q2NL82 804 aaKnown RBP9.89□□□□□ -0.83
HDAC7-229ENST00000549883 ZNF542PQ5EBM4 170 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 NCBP2-AS2Q69YL0 99 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 NEK5Q6P3R8 708 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 KANSL1Q7Z3B3 1105 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 TTC7BQ86TV6 843 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 MARCH9Q86YJ5 346 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 CNGA4Q8IV77 575 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 PQLC3Q8N755 202 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 RHBDD1Q8TEB9 315 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 SAP25Q8TEE9 199 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 LRIG1Q96JA1 1093 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 NCAPGQ9BPX3 1015 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 C1QTNF2Q9BXJ5 285 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 CALN1Q9BXU9 219 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 OSBPL1AQ9BXW6 950 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 SLC17A9Q9BYT1 436 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 CPEB1Q9BZB8 566 aaKnown RBP9.89□□□□□ -0.83
HDAC7-229ENST00000549883 TOR4AQ9NXH8 423 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 UVRAGQ9P2Y5 699 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 COQ6Q9Y2Z9 468 aa9.89□□□□□ -0.83
HDAC7-229ENST00000549883 GOLGA4Q13439 2230 aaKnown RBP9.88□□□□□ -0.83
HDAC7-229ENST00000549883 MAP1BP46821 2468 aaKnown RBP9.88□□□□□ -0.83
HDAC7-229ENST00000549883 A0A0U1RQS6 177 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 TSPAN11A1L157 253 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 RCCD1A6NED2 376 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 SOWAHDA6NJG2 315 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 C3orf70A6NLC5 250 aaPredicted RBP9.88□□□□□ -0.83
HDAC7-229ENST00000549883 GOLGA8CPA6NN73 597 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 A8MX80 341 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 NEMP1O14524 444 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 PCDHGA12O60330 932 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 TPM1P09493 284 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 FTH1P19P0C7X4 201 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 THEGLP0DJG4 465 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 HNRNPA2B1P22626 353 aaKnown RBP9.88□□□□□ -0.83
HDAC7-229ENST00000549883 IGFALSP35858 605 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 ZNF135P52742 658 aaPredicted RBP9.88□□□□□ -0.83
HDAC7-229ENST00000549883 RPS21P63220 83 aaKnown RBP9.88□□□□□ -0.83
HDAC7-229ENST00000549883 GBE1Q04446 702 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 LBRQ14739 615 aaKnown RBP9.88□□□□□ -0.83
HDAC7-229ENST00000549883 HADHQ16836 314 aaKnown RBP9.88□□□□□ -0.83
HDAC7-229ENST00000549883 ANKRD20A8PQ5CZ79 823 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 TMCO4Q5TGY1 634 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 Q6ZSR6 202 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 ABI3BPQ7Z7G0 1075 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 CHCHD4Q8N4Q1 142 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 KCTD6Q8NC69 237 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 FUBP1Q96AE4 644 aaKnown RBP9.88□□□□□ -0.83
HDAC7-229ENST00000549883 KLHDC7BQ96G42 594 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 FEM1CQ96JP0 617 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 SMIM14Q96QK8 99 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 PSKH2Q96QS6 385 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 CINPQ9BW66 212 aaPredicted RBP9.88□□□□□ -0.83
HDAC7-229ENST00000549883 SCNM1Q9BWG6 230 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 SUV39H2Q9H5I1 410 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 PCDH12Q9NPG4 1184 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 GDF3Q9NR23 364 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 MBNL1Q9NR56 388 aaKnown RBP9.88□□□□□ -0.83
HDAC7-229ENST00000549883 UCKL1Q9NWZ5 548 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 DKK3Q9UBP4 350 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 SALL4Q9UJQ4 1053 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 KLK13Q9UKR3 277 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 PNMA8BQ9ULN7 279 aaPredicted RBP9.88□□□□□ -0.83
HDAC7-229ENST00000549883 PCDHGB2Q9Y5G2 931 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 LRP4O75096 1905 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 MYLKQ15746 1914 aa9.88□□□□□ -0.83
HDAC7-229ENST00000549883 COL5A1P20908 1838 aaPredicted RBP9.87□□□□□ -0.83
HDAC7-229ENST00000549883 TRAFD1O14545 582 aaPredicted RBP9.87□□□□□ -0.83
HDAC7-229ENST00000549883 FLRT2O43155 660 aa9.87□□□□□ -0.83
HDAC7-229ENST00000549883 TSPAN6O43657 245 aa9.87□□□□□ -0.83
HDAC7-229ENST00000549883 MTA2O94776 668 aa9.87□□□□□ -0.83
HDAC7-229ENST00000549883 MYF5P13349 255 aa9.87□□□□□ -0.83
HDAC7-229ENST00000549883 TNNT1P13805 278 aa9.87□□□□□ -0.83
HDAC7-229ENST00000549883 CR2P20023 1033 aa9.87□□□□□ -0.83
HDAC7-229ENST00000549883 KDELR1P24390 212 aa9.87□□□□□ -0.83
HDAC7-229ENST00000549883 EPHA8P29322 1005 aaPredicted RBP9.87□□□□□ -0.83
HDAC7-229ENST00000549883 AKT2P31751 481 aa9.87□□□□□ -0.83
HDAC7-229ENST00000549883 MAN1A1P33908 653 aa9.87□□□□□ -0.83
HDAC7-229ENST00000549883 NUDT1P36639 197 aa9.87□□□□□ -0.83
HDAC7-229ENST00000549883 CSNK1DP48730 415 aa9.87□□□□□ -0.83
HDAC7-229ENST00000549883 SCNN1BP51168 640 aa9.87□□□□□ -0.83
HDAC7-229ENST00000549883 CLDN6P56747 220 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms