RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 OPA1O60313 960 aa17.61■□□□□ 0.41
CHMP1A-205ENST00000548650 GP1BAP07359 652 aa17.61■□□□□ 0.41
CHMP1A-205ENST00000548650 CDK11BP21127 795 aaKnown RBP17.61■□□□□ 0.41
CHMP1A-205ENST00000548650 EIF2B5Q13144 721 aaKnown RBP17.61■□□□□ 0.41
CHMP1A-205ENST00000548650 CCDC183Q5T5S1 534 aa17.61■□□□□ 0.41
CHMP1A-205ENST00000548650 ZCCHC8Q6NZY4 707 aaKnown RBP17.61■□□□□ 0.41
CHMP1A-205ENST00000548650 DCUN1D2Q6PH85 259 aa17.61■□□□□ 0.41
CHMP1A-205ENST00000548650 VPS36Q86VN1 386 aa17.61■□□□□ 0.41
CHMP1A-205ENST00000548650 EXOC2Q96KP1 924 aa17.61■□□□□ 0.41
CHMP1A-205ENST00000548650 BBC3Q96PG8 261 aaPredicted RBP17.61■□□□□ 0.41
CHMP1A-205ENST00000548650 LRRC19Q9H756 370 aa17.61■□□□□ 0.41
CHMP1A-205ENST00000548650 CATSPERBQ9H7T0 1116 aa17.61■□□□□ 0.41
CHMP1A-205ENST00000548650 DKK3Q9UBP4 350 aa17.61■□□□□ 0.41
CHMP1A-205ENST00000548650 PNMA8BQ9ULN7 279 aaPredicted RBP17.61■□□□□ 0.41
CHMP1A-205ENST00000548650 CSNK1G3Q9Y6M4 447 aa17.61■□□□□ 0.41
CHMP1A-205ENST00000548650 RP1P56715 2156 aa17.61■□□□□ 0.41
CHMP1A-205ENST00000548650 TSPAN11A1L157 253 aa17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 INSIG1O15503 277 aa17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 ATMINO43313 823 aaPredicted RBP17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 AQP9O43315 295 aa17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 MMP20O60882 483 aa17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 PIGNO95427 931 aa17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 JUNDP17535 347 aa17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 ITIH2P19823 946 aa17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 ITPKBP27987 946 aa17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 HTR7P34969 479 aa17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 TPI1P60174 286 aa17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 TYRO3Q06418 890 aa17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 RAD51Q06609 339 aa17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 IRF2BP2Q7Z5L9 587 aa17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 RBFAQ8N0V3 343 aa17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 TP53I13Q8NBR0 393 aaPredicted RBP17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 GPATCH2LQ9NWQ4 482 aa17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 IPO11Q9UI26 975 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 MYO6Q9UM54 1294 aa17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 AP4E1Q9UPM8 1137 aa17.6■□□□□ 0.41
CHMP1A-205ENST00000548650 GOLGA6L22H0YM25 854 aa17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 TEX33O43247 280 aa17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 LZTS3O60299 673 aaPredicted RBP17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 MBD3O95983 291 aa17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 CCDC172P0C7W6 258 aa17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 TIMP2P16035 220 aa17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 MAMLD1Q13495 774 aa17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 CYTH1Q15438 398 aa17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 DEFB133Q30KQ1 61 aa17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 TBC1D25Q3MII6 688 aa17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 E4F1Q66K89 784 aaPredicted RBP17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 PLEKHA7Q6IQ23 1121 aa17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 MACC1Q6ZN28 852 aa17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 TTC7BQ86TV6 843 aa17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 IFI44Q8TCB0 444 aa17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 CXorf40AQ8TE69 158 aa17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 PEBP4Q96S96 227 aa17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 WRAP53Q9BUR4 548 aaKnown RBP17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 LRRC61Q9BV99 259 aa17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 CPEB1Q9BZB8 566 aaKnown RBP17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 TCEAL2Q9H3H9 227 aaPredicted RBP17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 MBNL1Q9NR56 388 aaKnown RBP17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 EVA1BQ9NVM1 165 aa17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 UBA2Q9UBT2 640 aaPredicted RBP17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 APOBEC3BQ9UH17 382 aaKnown RBP17.59■□□□□ 0.41
CHMP1A-205ENST00000548650 LRRC53A6NM62 1247 aa17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 PRAMEF11O60813 436 aa17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 TM7SF2O76062 418 aa17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 PSMA2P25787 234 aa17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 DUSP3P51452 185 aaPredicted RBP17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 THOP1P52888 689 aa17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 IRF4Q15306 451 aa17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 CDKN3Q16667 212 aa17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 CA9Q16790 459 aa17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 GUSBP11Q6P575 273 aa17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 CYP4V2Q6ZWL3 525 aaPredicted RBP17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 DNAAF5Q86Y56 855 aa17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 PHACTR4Q8IZ21 702 aa17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 ARFGAP1Q8N6T3 406 aa17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 LMX1AQ8TE12 382 aa17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 VCPIP1Q96JH7 1222 aa17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 TBATAQ96M53 351 aa17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 DEPDC7Q96QD5 511 aa17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 NCAPGQ9BPX3 1015 aa17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 SNRNP25Q9BV90 132 aaKnown RBP17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 C1QTNF7Q9BXJ2 289 aa17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 RTN4Q9NQC3 1192 aaKnown RBP17.58■□□□□ 0.4
CHMP1A-205ENST00000548650 TMCO5BA8MYB1 307 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 EIF3CLB5ME19 914 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 J3KR12 359 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 TPP1O14773 563 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 CSO75390 466 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 GCATO75600 419 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 DESP17661 470 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 SUOXP51687 545 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 NDST2P52849 883 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 YPEL5P62699 121 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 ELP6Q0PNE2 266 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 PTK2BQ14289 1009 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 KLHL40Q2TBA0 621 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 TMEM52BQ4KMG9 183 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 ANO6Q4KMQ2 910 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 PPP1R2P3Q6NXS1 205 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 ZSWIM9Q86XI8 627 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms