RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 HMCESQ96FZ2 354 aa20.63■□□□□ 0.89
SSH1-207ENST00000547862 MCEEQ96PE7 176 aa20.63■□□□□ 0.89
SSH1-207ENST00000547862 EPAS1Q99814 870 aa20.63■□□□□ 0.89
SSH1-207ENST00000547862 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.63■□□□□ 0.89
SSH1-207ENST00000547862 LRRC61Q9BV99 259 aa20.63■□□□□ 0.89
SSH1-207ENST00000547862 POLR1BQ9H9Y6 1135 aa20.63■□□□□ 0.89
SSH1-207ENST00000547862 SPASTQ9UBP0 616 aa20.63■□□□□ 0.89
SSH1-207ENST00000547862 CASC3O15234 703 aaKnown RBP20.62■□□□□ 0.89
SSH1-207ENST00000547862 INSIG1O15503 277 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 C1QL1O75973 258 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 TM7SF2O76062 418 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 ZIC2O95409 532 aaPredicted RBP20.62■□□□□ 0.89
SSH1-207ENST00000547862 UNGP13051 313 aaPredicted RBP20.62■□□□□ 0.89
SSH1-207ENST00000547862 ADKP55263 362 aaKnown RBP20.62■□□□□ 0.89
SSH1-207ENST00000547862 RAD51Q06609 339 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 C19orf57Q0VDD7 668 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 PTK2BQ14289 1009 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 IRF4Q15306 451 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 CLEC16AQ2KHT3 1053 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 KLHL40Q2TBA0 621 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 FAXCQ5TGI0 409 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 CDKAL1Q5VV42 579 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 BROXQ5VW32 411 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 WDR59Q6PJI9 974 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 PLPP6Q8IY26 295 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 RTL3Q8N8U3 475 aaKnown RBP20.62■□□□□ 0.89
SSH1-207ENST00000547862 NEK11Q8NG66 645 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 ENOX1Q8TC92 643 aaKnown RBP20.62■□□□□ 0.89
SSH1-207ENST00000547862 KCNE4Q8WWG9 221 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 NTAN1Q96AB6 310 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 ATXN7L3BQ96GX2 97 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 VCPIP1Q96JH7 1222 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 ZNF578Q96N58 590 aaPredicted RBP20.62■□□□□ 0.89
SSH1-207ENST00000547862 C1QTNF7Q9BXJ2 289 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 NOL6Q9H6R4 1146 aaKnown RBP20.62■□□□□ 0.89
SSH1-207ENST00000547862 CPNE5Q9HCH3 593 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 MBNL1Q9NR56 388 aaKnown RBP20.62■□□□□ 0.89
SSH1-207ENST00000547862 WDR70Q9NW82 654 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 PNMA8BQ9ULN7 279 aaPredicted RBP20.62■□□□□ 0.89
SSH1-207ENST00000547862 CSNK1G3Q9Y6M4 447 aa20.62■□□□□ 0.89
SSH1-207ENST00000547862 ZSCAN5CA6NGD5 496 aaPredicted RBP20.61■□□□□ 0.89
SSH1-207ENST00000547862 GCATO75600 419 aa20.61■□□□□ 0.89
SSH1-207ENST00000547862 CALB1P05937 261 aa20.61■□□□□ 0.89
SSH1-207ENST00000547862 ANXA6P08133 673 aa20.61■□□□□ 0.89
SSH1-207ENST00000547862 CELA2BP08218 269 aaPredicted RBP20.61■□□□□ 0.89
SSH1-207ENST00000547862 COPB1P53618 953 aaKnown RBP20.61■□□□□ 0.89
SSH1-207ENST00000547862 ISXQ2M1V0 245 aa20.61■□□□□ 0.89
SSH1-207ENST00000547862 SLC35F3Q8IY50 421 aa20.61■□□□□ 0.89
SSH1-207ENST00000547862 C3orf20Q8ND61 904 aa20.61■□□□□ 0.89
SSH1-207ENST00000547862 BTN2A2Q8WVV5 523 aa20.61■□□□□ 0.89
SSH1-207ENST00000547862 CENPIQ92674 756 aaPredicted RBP20.61■□□□□ 0.89
SSH1-207ENST00000547862 VOPP1Q96AW1 172 aa20.61■□□□□ 0.89
SSH1-207ENST00000547862 SLC13A1Q9BZW2 595 aa20.61■□□□□ 0.89
SSH1-207ENST00000547862 TTYH3Q9C0H2 523 aa20.61■□□□□ 0.89
SSH1-207ENST00000547862 SIRPGQ9P1W8 387 aa20.61■□□□□ 0.89
SSH1-207ENST00000547862 DOLKQ9UPQ8 538 aa20.61■□□□□ 0.89
SSH1-207ENST00000547862 SIK3Q9Y2K2 1263 aa20.61■□□□□ 0.89
SSH1-207ENST00000547862 PMS2P1A4D2B8 440 aa20.6■□□□□ 0.89
SSH1-207ENST00000547862 ANKRD62A6NC57 917 aa20.6■□□□□ 0.89
SSH1-207ENST00000547862 RASA4BC9J798 803 aa20.6■□□□□ 0.89
SSH1-207ENST00000547862 AREL1O15033 823 aa20.6■□□□□ 0.89
SSH1-207ENST00000547862 KLK10O43240 276 aa20.6■□□□□ 0.89
SSH1-207ENST00000547862 RASA4O43374 803 aa20.6■□□□□ 0.89
SSH1-207ENST00000547862 ARHGAP40Q5TG30 622 aa20.6■□□□□ 0.89
SSH1-207ENST00000547862 MACC1Q6ZN28 852 aa20.6■□□□□ 0.89
SSH1-207ENST00000547862 RBM44Q6ZP01 1051 aaKnown RBP20.6■□□□□ 0.89
SSH1-207ENST00000547862 MON1BQ7L1V2 547 aa20.6■□□□□ 0.89
SSH1-207ENST00000547862 LSMEM2Q8N112 164 aa20.6■□□□□ 0.89
SSH1-207ENST00000547862 TP53I13Q8NBR0 393 aaPredicted RBP20.6■□□□□ 0.89
SSH1-207ENST00000547862 CENPTQ96BT3 561 aa20.6■□□□□ 0.89
SSH1-207ENST00000547862 THSD1Q9NS62 852 aa20.6■□□□□ 0.89
SSH1-207ENST00000547862 FANCLQ9NW38 375 aa20.6■□□□□ 0.89
SSH1-207ENST00000547862 GPATCH2LQ9NWQ4 482 aa20.6■□□□□ 0.89
SSH1-207ENST00000547862 NCKIPSDQ9NZQ3 722 aa20.6■□□□□ 0.89
SSH1-207ENST00000547862 LHX3Q9UBR4 397 aa20.6■□□□□ 0.89
SSH1-207ENST00000547862 TEX51A0A1B0GUA7 166 aa20.59■□□□□ 0.89
SSH1-207ENST00000547862 EIF4A3P38919 411 aaKnown RBP20.59■□□□□ 0.89
SSH1-207ENST00000547862 LSSP48449 732 aa20.59■□□□□ 0.89
SSH1-207ENST00000547862 GSCP56915 257 aaPredicted RBP20.59■□□□□ 0.89
SSH1-207ENST00000547862 TMPRSS3P57727 454 aa20.59■□□□□ 0.89
SSH1-207ENST00000547862 TAF1BQ53T94 588 aaPredicted RBP20.59■□□□□ 0.89
SSH1-207ENST00000547862 C6orf132Q5T0Z8 1188 aa20.59■□□□□ 0.89
SSH1-207ENST00000547862 CFAP58Q5T655 872 aa20.59■□□□□ 0.89
SSH1-207ENST00000547862 PHF13Q86YI8 300 aaPredicted RBP20.59■□□□□ 0.89
SSH1-207ENST00000547862 HID1Q8IV36 788 aa20.59■□□□□ 0.89
SSH1-207ENST00000547862 ASB12Q8WXK4 309 aa20.59■□□□□ 0.89
SSH1-207ENST00000547862 GLMNQ92990 594 aa20.59■□□□□ 0.89
SSH1-207ENST00000547862 HIC2Q96JB3 615 aa20.59■□□□□ 0.89
SSH1-207ENST00000547862 RETREG1Q9H6L5 497 aa20.59■□□□□ 0.89
SSH1-207ENST00000547862 ASCL3Q9NQ33 180 aa20.59■□□□□ 0.89
SSH1-207ENST00000547862 GULP1Q9UBP9 304 aa20.59■□□□□ 0.89
SSH1-207ENST00000547862 SALL4Q9UJQ4 1053 aa20.59■□□□□ 0.89
SSH1-207ENST00000547862 ENTPD2Q9Y5L3 495 aa20.59■□□□□ 0.89
SSH1-207ENST00000547862 CXorf51AA0A1B0GTR3 108 aa20.58■□□□□ 0.89
SSH1-207ENST00000547862 EME2A4GXA9 379 aaPredicted RBP20.58■□□□□ 0.89
SSH1-207ENST00000547862 PRKCGP05129 697 aa20.58■□□□□ 0.89
SSH1-207ENST00000547862 PCCBP05166 539 aa20.58■□□□□ 0.89
SSH1-207ENST00000547862 TIMP2P16035 220 aa20.58■□□□□ 0.89
SSH1-207ENST00000547862 TSHRP16473 764 aa20.58■□□□□ 0.89
SSH1-207ENST00000547862 RPIAP49247 311 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms