RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 JAK3P52333 1124 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 PRKCEQ02156 737 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 CYP24A1Q07973 514 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 DGCR6Q14129 220 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 GRB14Q14449 540 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 CCL15Q16663 113 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 C15orf59Q2T9L4 293 aaPredicted RBP5.55□□□□□ -1.52
LIMA1-203ENST00000547825 FNBP1LQ5T0N5 605 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 TEDDM1Q5T9Z0 273 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 ZBTB37Q5TC79 503 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 NET1Q7Z628 596 aaPredicted RBP5.55□□□□□ -1.52
LIMA1-203ENST00000547825 CMC1Q7Z7K0 106 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 CCDC60Q8IWA6 550 aaPredicted RBP5.55□□□□□ -1.52
LIMA1-203ENST00000547825 FAM71AQ8IYT1 594 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 FBXW8Q8N3Y1 598 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 UBASH3BQ8TF42 649 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 PDCD6IPQ8WUM4 868 aaKnown RBP5.55□□□□□ -1.52
LIMA1-203ENST00000547825 RXFP2Q8WXD0 754 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 ELMO1Q92556 727 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 ELMO2Q96JJ3 720 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 CIB1Q99828 191 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 OMDQ99983 421 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 NACA2Q9H009 215 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 POLR1BQ9H9Y6 1135 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 MYRFQ9Y2G1 1151 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 ZNF451Q9Y4E5 1061 aa5.55□□□□□ -1.52
LIMA1-203ENST00000547825 PRUNE2Q8WUY3 3088 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 TRAV20A0A0B4J274 112 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 ZNF839A8K0R7 811 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 DFFAO00273 331 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 GLRA3O75311 464 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 TRMUO75648 421 aaKnown RBP5.54□□□□□ -1.52
LIMA1-203ENST00000547825 TOP3BO95985 862 aaKnown RBP5.54□□□□□ -1.52
LIMA1-203ENST00000547825 BCL10O95999 233 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 TFPTP0C1Z6 253 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 DRD2P14416 443 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 MIPP30301 263 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 NUP107P57740 925 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 GSTA3Q16772 222 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 FAM83EQ2M2I3 478 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 DCAF6Q58WW2 860 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 ASRGL1Q7L266 308 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 FASTKD5Q7L8L6 764 aaKnown RBP5.54□□□□□ -1.52
LIMA1-203ENST00000547825 PLD3Q8IV08 490 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 MIER2Q8N344 545 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 FAM47BQ8NA70 645 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 IPMKQ8NFU5 416 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 BTN2A2Q8WVV5 523 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 PSPC1Q8WXF1 523 aaKnown RBP5.54□□□□□ -1.52
LIMA1-203ENST00000547825 JADE3Q92613 823 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 CD101Q93033 1021 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 RCN3Q96D15 328 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 ATXN3LQ9H3M9 355 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 S100A14Q9HCY8 104 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 TRNAU1APQ9NX07 287 aaKnown RBP5.54□□□□□ -1.52
LIMA1-203ENST00000547825 VAV3Q9UKW4 847 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 NR2E3Q9Y5X4 410 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 PRRC2BQ5JSZ5 2229 aaKnown RBP5.54□□□□□ -1.52
LIMA1-203ENST00000547825 NCANO14594 1321 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 UMODL1Q5DID0 1318 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 SMIM31A0A1B0GVY4 71 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 MYO1GB0I1T2 1018 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 C9JVG2 144 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 H0Y626 953 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 NR5A2O00482 541 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 ALOX15BO15296 676 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 DEAF1O75398 565 aaPredicted RBP5.54□□□□□ -1.52
LIMA1-203ENST00000547825 PMPCBO75439 489 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 SPAG6O75602 509 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 RFPL3O75679 317 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 DGAT1O75907 488 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 WFS1O76024 890 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 TM7SF2O76062 418 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 RASGRP1O95267 797 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 TRIM16O95361 564 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 ESRRBO95718 433 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 CCDC159P0C7I6 412 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 IVDP26440 423 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 MGAT1P26572 445 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 ADSLP30566 484 aaPredicted RBP5.54□□□□□ -1.52
LIMA1-203ENST00000547825 ABCD1P33897 745 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 GNALP38405 381 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 HADHAP40939 763 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 CDH15P55291 814 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 PRMT2P55345 433 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 SPIDRQ14159 915 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 RNFT1Q5M7Z0 435 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 PRAMEF13Q5VWM6 474 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 CDCA2Q69YH5 1023 aaPredicted RBP5.54□□□□□ -1.52
LIMA1-203ENST00000547825 DENND1BQ6P3S1 775 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 CTU1Q7Z7A3 348 aaKnown RBP5.54□□□□□ -1.52
LIMA1-203ENST00000547825 NAT16Q8N8M0 369 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 SHCBP1Q8NEM2 672 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 C10orf82Q8WW14 230 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 CAPSLQ8WWF8 208 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 SHC3Q92529 594 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 TRIM15Q9C019 465 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 NRDE2Q9H7Z3 1164 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 TRPC7Q9HCX4 862 aa5.54□□□□□ -1.52
LIMA1-203ENST00000547825 EXOSC4Q9NPD3 245 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms