RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 CCNI2Q6ZMN8 369 aaPredicted RBP12.27□□□□□ -0.45
HDAC7-226ENST00000547259 ZC3H18Q86VM9 953 aaKnown RBP12.27□□□□□ -0.45
HDAC7-226ENST00000547259 CDKL3Q8IVW4 592 aaPredicted RBP12.27□□□□□ -0.45
HDAC7-226ENST00000547259 GALNT15Q8N3T1 639 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 CCNYQ8ND76 341 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 C1orf54Q8WWF1 131 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 ATG4AQ8WYN0 398 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 HDAC11Q96DB2 347 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 LMLNQ96KR4 655 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 OLFM3Q96PB7 478 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 AP1M1Q9BXS5 423 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 FRMD8P1Q9BZ68 369 aaPredicted RBP12.27□□□□□ -0.45
HDAC7-226ENST00000547259 CIPCQ9C0C6 399 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 MKRN2Q9H000 416 aaKnown RBP12.27□□□□□ -0.45
HDAC7-226ENST00000547259 GAREM1Q9H706 876 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 TM7SF3Q9NS93 570 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 SLC25A13Q9UJS0 675 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 CDC23Q9UJX2 597 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 RALYQ9UKM9 306 aaKnown RBP12.27□□□□□ -0.45
HDAC7-226ENST00000547259 PCOLCE2Q9UKZ9 415 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 INTS6Q9UL03 887 aaKnown RBP12.27□□□□□ -0.45
HDAC7-226ENST00000547259 R3HDM2Q9Y2K5 976 aaKnown RBP12.27□□□□□ -0.45
HDAC7-226ENST00000547259 PTPRBP23467 1997 aa12.27□□□□□ -0.45
HDAC7-226ENST00000547259 ASXL3Q9C0F0 2248 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 HACD1B0YJ81 288 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 KDELR3O43731 214 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 DFNA5O60443 496 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 SNAP91O60641 907 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 EPHX1P07099 455 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 RBP3P10745 1247 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 GLDCP23378 1020 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 MAOBP27338 520 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 SULT2A1Q06520 285 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 AP1B1Q10567 949 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 XRCC4Q13426 336 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 SNX1Q13596 522 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 TUBB2AQ13885 445 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 WHAMMP3Q1A5X7 153 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 INAVAQ3KP66 663 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 RETSATQ6NUM9 610 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 DBX2Q6ZNG2 339 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 ARHGAP36Q6ZRI8 547 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 KIAA0907Q7Z7F0 614 aaPredicted RBP12.26□□□□□ -0.45
HDAC7-226ENST00000547259 ADIPOR2Q86V24 386 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 LRRC49Q8IUZ0 686 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 ZCCHC9Q8N567 271 aaKnown RBP12.26□□□□□ -0.45
HDAC7-226ENST00000547259 OR2I1PQ8NGU4 316 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 OR2T3Q8NH03 318 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 LRRN4Q8WUT4 740 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 TFB1MQ8WVM0 346 aaKnown RBP12.26□□□□□ -0.45
HDAC7-226ENST00000547259 SKA1Q96BD8 255 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 ALG14Q96F25 216 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 QKIQ96PU8 341 aaKnown RBP eCLIP12.26□□□□□ -0.45
HDAC7-226ENST00000547259 TUBB2BQ9BVA1 445 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 ACE2Q9BYF1 805 aaPredicted RBP12.26□□□□□ -0.45
HDAC7-226ENST00000547259 HOMER3Q9NSC5 361 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 IPO11Q9UI26 975 aaKnown RBP12.26□□□□□ -0.45
HDAC7-226ENST00000547259 VPS51Q9UID3 782 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 OR51B4Q9Y5P0 310 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 MRFAP1Q9Y605 127 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 NUMA1Q14980 2115 aa12.26□□□□□ -0.45
HDAC7-226ENST00000547259 IGSF10Q6WRI0 2623 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 PLXNB3Q9ULL4 1909 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 ZSCAN5CA6NGD5 496 aaPredicted RBP12.25□□□□□ -0.45
HDAC7-226ENST00000547259 J3KR12 359 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 PDE2AO00408 941 aaPredicted RBP12.25□□□□□ -0.45
HDAC7-226ENST00000547259 LIASO43766 372 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 PRAMEF11O60813 436 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 CBFA2T3O75081 653 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 PHF2O75151 1096 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 ASLP04424 464 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 ATP5BP06576 529 aaKnown RBP12.25□□□□□ -0.45
HDAC7-226ENST00000547259 C7P10643 843 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 GEMIN4P57678 1058 aaKnown RBP12.25□□□□□ -0.45
HDAC7-226ENST00000547259 ARF5P84085 180 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 IL10RBQ08334 325 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 PPIDQ08752 370 aaKnown RBP12.25□□□□□ -0.45
HDAC7-226ENST00000547259 CAMK2GQ13555 558 aaPredicted RBP12.25□□□□□ -0.45
HDAC7-226ENST00000547259 PRKD1Q15139 912 aaPredicted RBP12.25□□□□□ -0.45
HDAC7-226ENST00000547259 CCNG2Q16589 344 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 TTC31Q49AM3 519 aaPredicted RBP12.25□□□□□ -0.45
HDAC7-226ENST00000547259 SLC45A4Q5BKX6 768 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 DARS2Q6PI48 645 aaKnown RBP12.25□□□□□ -0.45
HDAC7-226ENST00000547259 LEKR1Q6ZMV7 388 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 B4GALNT4Q76KP1 1039 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 CCDC13Q8IYE1 715 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 SLC35B2Q8TB61 432 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 RHBDD1Q8TEB9 315 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 NSMCE1Q8WV22 266 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 CCDC114Q96M63 670 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 CAMK1GQ96NX5 476 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 LGMNQ99538 433 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 FERMT1Q9BQL6 677 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 BRD8Q9H0E9 1235 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 SLC6A17Q9H1V8 727 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 SEPT10Q9P0V9 454 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 UBA2Q9UBT2 640 aaPredicted RBP12.25□□□□□ -0.45
HDAC7-226ENST00000547259 DKK4Q9UBT3 224 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 SUN2Q9UH99 717 aa12.25□□□□□ -0.45
HDAC7-226ENST00000547259 EIF2B4Q9UI10 523 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms