RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 FASTKD1Q53R41 847 aaKnown RBP12.08□□□□□ -0.48
CCDC38-202ENST00000546386 PKN3Q6P5Z2 889 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 BEND5Q7L4P6 421 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 ALYREFQ86V81 257 aaKnown RBP12.08□□□□□ -0.48
CCDC38-202ENST00000546386 LZTR1Q8N653 840 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 KREMEN2Q8NCW0 462 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 LPCAT1Q8NF37 534 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 NSMCE1Q8WV22 266 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 TMA16Q96EY4 203 aaKnown RBP12.08□□□□□ -0.48
CCDC38-202ENST00000546386 IMP4Q96G21 291 aaKnown RBP12.08□□□□□ -0.48
CCDC38-202ENST00000546386 ZSWIM3Q96MP5 696 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 SLC46A2Q9BY10 475 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 MFRPQ9BY79 579 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 MTG2Q9H4K7 406 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 MAN1C1Q9NR34 630 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 STK38LQ9Y2H1 464 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.08□□□□□ -0.48
CCDC38-202ENST00000546386 ACTL7BQ9Y614 415 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 NOTCH4Q99466 2003 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 DRGXA6NNA5 263 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 RFXAPO00287 272 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 USP1O94782 785 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 C2P06681 752 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 LAG3P18627 525 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 GP5P40197 560 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 CSKP41240 450 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 CPA2P48052 419 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 OXCT1P55809 520 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 C1QTNF8P60827 252 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 SLC18A2Q05940 514 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 USP4Q13107 963 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 RAB33AQ14088 237 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 LGSNQ5TDP6 509 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 STEAP4Q687X5 459 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 TIGD7Q6NT04 549 aaPredicted RBP12.08□□□□□ -0.48
CCDC38-202ENST00000546386 KDELC1Q6UW63 502 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 C4orf22Q6V702 233 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 NAPRTQ6XQN6 538 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 ELMO2Q96JJ3 720 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 SCYL1Q96KG9 808 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 EBF4Q9BQW3 602 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 TTLL2Q9BWV7 592 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 KLF16Q9BXK1 252 aaPredicted RBP12.08□□□□□ -0.48
CCDC38-202ENST00000546386 MYLK2Q9H1R3 596 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 CYP4F12Q9HCS2 524 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 SOX13Q9UN79 622 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 SPO11Q9Y5K1 396 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 F5P12259 2224 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 PIGNO95427 931 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 GSRP00390 522 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 CD1EP15812 388 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 PBX2P40425 430 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 CORO7P57737 925 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 ARF5P84085 180 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 THOC5Q13769 683 aaKnown RBP12.07□□□□□ -0.48
CCDC38-202ENST00000546386 TMEM240Q5SV17 173 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 CXorf57Q6NSI4 855 aaKnown RBP12.07□□□□□ -0.48
CCDC38-202ENST00000546386 CAMK1DQ8IU85 385 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 OR13J1Q8NGT2 312 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 VAT1Q99536 393 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 RBBP8Q99708 897 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 CINPQ9BW66 212 aaPredicted RBP12.07□□□□□ -0.48
CCDC38-202ENST00000546386 FRMD8Q9BZ67 464 aaPredicted RBP12.07□□□□□ -0.48
CCDC38-202ENST00000546386 SLC25A51Q9H1U9 297 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 TASP1Q9H6P5 420 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 IL23AQ9NPF7 189 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 KLHL14Q9P2G3 628 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 HAO1Q9UJM8 370 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 GOLGA4Q13439 2230 aaKnown RBP12.07□□□□□ -0.48
CCDC38-202ENST00000546386 PRAMEF11O60813 436 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 PAX3P23760 479 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 ALDH3A1P30838 453 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 CD70P32970 193 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 SCTRP47872 440 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 SERPINH1P50454 418 aaKnown RBP12.07□□□□□ -0.48
CCDC38-202ENST00000546386 NDST2P52849 883 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 GEMP55040 296 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 KCNJ2P63252 427 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 ANO4Q32M45 955 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 ACCSLQ4AC99 568 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 PCID2Q5JVF3 399 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 SPANXN3Q5MJ09 141 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 SNX30Q5VWJ9 437 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 PPHLN1Q8NEY8 458 aaKnown RBP12.07□□□□□ -0.48
CCDC38-202ENST00000546386 ZFYVE19Q96K21 471 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 NSRP1Q9H0G5 558 aaKnown RBP12.07□□□□□ -0.48
CCDC38-202ENST00000546386 CCDC134Q9H6E4 229 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 SENP1Q9P0U3 644 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 TCAF1Q9Y4C2 921 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 PCDHB9Q9Y5E1 797 aa12.07□□□□□ -0.48
CCDC38-202ENST00000546386 A8MUI8 341 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.06□□□□□ -0.48
CCDC38-202ENST00000546386 CD160O95971 181 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 CA3P07451 260 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 SERPINB3P29508 390 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 ARCN1P48444 511 aaKnown RBP12.06□□□□□ -0.48
CCDC38-202ENST00000546386 FPGSQ05932 587 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 SEMA3AQ14563 771 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 TEAD2Q15562 447 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 TRIM68Q6AZZ1 485 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms