RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 SCAIQ8N9R8 606 aa4.34□□□□□ -1.71
SNHG1-222ENST00000545308 TMEM116Q8NCL8 245 aa4.34□□□□□ -1.71
SNHG1-222ENST00000545308 CADM4Q8NFZ8 388 aa4.34□□□□□ -1.71
SNHG1-222ENST00000545308 IP6K1Q92551 441 aa4.34□□□□□ -1.71
SNHG1-222ENST00000545308 SLC9A6Q92581 669 aa4.34□□□□□ -1.71
SNHG1-222ENST00000545308 CELF1Q92879 486 aaKnown RBP4.34□□□□□ -1.71
SNHG1-222ENST00000545308 ARHGEF2Q92974 986 aaKnown RBP4.34□□□□□ -1.71
SNHG1-222ENST00000545308 ADAD1Q96M93 576 aaKnown RBP4.34□□□□□ -1.71
SNHG1-222ENST00000545308 HS6ST2Q96MM7 605 aa4.34□□□□□ -1.71
SNHG1-222ENST00000545308 YME1L1Q96TA2 773 aa4.34□□□□□ -1.71
SNHG1-222ENST00000545308 FRMD8Q9BZ67 464 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-222ENST00000545308 POLR1BQ9H9Y6 1135 aa4.34□□□□□ -1.71
SNHG1-222ENST00000545308 ERVK-5Q9HDB9 667 aa4.34□□□□□ -1.71
SNHG1-222ENST00000545308 C20orf141Q9NUB4 165 aa4.34□□□□□ -1.71
SNHG1-222ENST00000545308 NLKQ9UBE8 527 aa4.34□□□□□ -1.71
SNHG1-222ENST00000545308 ZNF70Q9UC06 446 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-222ENST00000545308 FBXO4Q9UKT5 387 aa4.34□□□□□ -1.71
SNHG1-222ENST00000545308 MKLN1Q9UL63 735 aa4.34□□□□□ -1.71
SNHG1-222ENST00000545308 PASKQ96RG2 1323 aa4.34□□□□□ -1.71
SNHG1-222ENST00000545308 CEP162Q5TB80 1403 aa4.34□□□□□ -1.71
SNHG1-222ENST00000545308 DUOX2Q9NRD8 1548 aa4.34□□□□□ -1.71
SNHG1-222ENST00000545308 EHBP1L1Q8N3D4 1523 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 LRPPRCP42704 1394 aaKnown RBP4.33□□□□□ -1.72
SNHG1-222ENST00000545308 SPATA31A5Q5VU36 1347 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 SPATA31A7Q8IWB4 1347 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 TARSL2A2RTX5 802 aaKnown RBP4.33□□□□□ -1.72
SNHG1-222ENST00000545308 OR6C68A6NDL8 312 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 SNAP23O00161 211 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 LIASO43766 372 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 HBP1O60381 514 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 ADAP00813 363 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 ENO1P06733 434 aaKnown RBP4.33□□□□□ -1.72
SNHG1-222ENST00000545308 NR2F1P10589 423 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 FCGR2AP12318 317 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 DRD4P21917 467 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 TTKP33981 857 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 PPARGP37231 505 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-222ENST00000545308 UBA7P41226 1012 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 OAZ1P54368 228 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 MRPS35P82673 323 aaKnown RBP4.33□□□□□ -1.72
SNHG1-222ENST00000545308 RHAGQ02094 409 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 STK4Q13043 487 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 LARS2Q15031 903 aaKnown RBP4.33□□□□□ -1.72
SNHG1-222ENST00000545308 RPE65Q16518 533 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 PAPD7Q5XG87 772 aaKnown RBP4.33□□□□□ -1.72
SNHG1-222ENST00000545308 SLC30A6Q6NXT4 461 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 RPUSD3Q6P087 351 aaKnown RBP4.33□□□□□ -1.72
SNHG1-222ENST00000545308 AADACL2Q6P093 401 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 KLHL35Q6PF15 583 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 MOB3CQ70IA8 216 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 SLC46A3Q7Z3Q1 461 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 ANKRD23Q86SG2 305 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 RHPN2Q8IUC4 686 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 UNC5CLQ8IV45 518 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 C17orf53Q8N3J3 647 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-222ENST00000545308 NKAIN3Q8N8D7 197 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 CCDC191Q8NCU4 936 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 CAGE1Q8TC20 777 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 ACTRT2Q8TDY3 377 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 HIC2Q96JB3 615 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 CADM1Q9BY67 442 aaKnown RBP4.33□□□□□ -1.72
SNHG1-222ENST00000545308 ZCCHC17Q9NP64 241 aaKnown RBP4.33□□□□□ -1.72
SNHG1-222ENST00000545308 SNTG1Q9NSN8 517 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 EHD2Q9NZN4 543 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 FOXJ2Q9P0K8 574 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 KIAA1456Q9P272 454 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 INTS6Q9UL03 887 aaKnown RBP4.33□□□□□ -1.72
SNHG1-222ENST00000545308 TMEM5Q9Y2B1 443 aa4.33□□□□□ -1.72
SNHG1-222ENST00000545308 SPHKAPQ2M3C7 1700 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 MARF1Q9Y4F3 1742 aaKnown RBP4.32□□□□□ -1.72
SNHG1-222ENST00000545308 NHSL1Q5SYE7 1610 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 DIP2AQ14689 1571 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 MAST1Q9Y2H9 1570 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 MYOM3Q5VTT5 1437 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 PNPLA6Q8IY17 1366 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 A0A1W2PQ09 198 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 MYO1GB0I1T2 1018 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 GCOM1H8Y6P7 765 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-222ENST00000545308 RRHO14718 337 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 BCAT2O15382 392 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-222ENST00000545308 PAGE4O60829 102 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 DKC1O60832 514 aaKnown RBP eCLIP4.32□□□□□ -1.722e-36■■□□□ 13.2
SNHG1-222ENST00000545308 CLTBP09497 229 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 EDN2P20800 178 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 FMO4P31512 558 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 DPP6P42658 865 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 CYP4A11Q02928 519 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 KPNB1Q14974 876 aaKnown RBP4.32□□□□□ -1.72
SNHG1-222ENST00000545308 TMEM65Q6PI78 240 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 DHRS13Q6UX07 377 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 RANBP10Q6VN20 620 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 KRT74Q7RTS7 529 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 TADA2BQ86TJ2 420 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 TAGAPQ8N103 731 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 SCML4Q8N228 414 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 GHDCQ8N2G8 530 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 TMEM217Q8N7C4 229 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 C11orf65Q8NCR3 313 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 NOC3LQ8WTT2 800 aaKnown RBP4.32□□□□□ -1.72
SNHG1-222ENST00000545308 RADILQ96JH8 1075 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms