RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 EIF3HO15372 352 aaKnown RBP eCLIP9.64□□□□□ -0.87
YBX3-215ENST00000544504 PPFIA2O75334 1257 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 TMCC1O94876 653 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 AP2A1O95782 977 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 IGSF6O95976 241 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 APODP05090 189 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 HLA-DQB2P05538 268 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 APRTP07741 180 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 SERPINF2P08697 491 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 DLDP09622 509 aaKnown RBP9.64□□□□□ -0.87
YBX3-215ENST00000544504 CISD3P0C7P0 127 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 C1QTNF9P0C862 333 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 MLNP12872 115 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 ETS1P14921 441 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 NFKB1P19838 968 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 PSMB4P28070 264 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 GRIA2P42262 883 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 RECQLP46063 649 aaPredicted RBP9.64□□□□□ -0.87
YBX3-215ENST00000544504 CARSP49589 748 aaKnown RBP9.64□□□□□ -0.87
YBX3-215ENST00000544504 ITGA8P53708 1063 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 ARL4CP56559 192 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 RHOAP61586 193 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 AP1S1P61966 158 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 SNRPD1P62314 119 aaKnown RBP9.64□□□□□ -0.87
YBX3-215ENST00000544504 VSNL1P62760 191 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 ARF5P84085 180 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 ITKQ08881 620 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 SLC10A7Q0GE19 358 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 KCNJ11Q14654 390 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 SLMAPQ14BN4 828 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 FUT11Q495W5 492 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 AASDHQ4L235 1098 aaPredicted RBP9.64□□□□□ -0.87
YBX3-215ENST00000544504 RNASEH2BQ5TBB1 312 aaKnown RBP9.64□□□□□ -0.87
YBX3-215ENST00000544504 ARMC3Q5W041 872 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 NAPEPLDQ6IQ20 393 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 B4GALNT4Q76KP1 1039 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 RALGPS2Q86X27 583 aaPredicted RBP9.64□□□□□ -0.87
YBX3-215ENST00000544504 KLHDC8BQ8IXV7 354 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 PLPP6Q8IY26 295 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 APCDD1Q8J025 514 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 PDIK1LQ8N165 341 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 ZNF687Q8N1G0 1237 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 ZCCHC9Q8N567 271 aaKnown RBP9.64□□□□□ -0.87
YBX3-215ENST00000544504 PCDH20Q8N6Y1 951 aaKnown RBP9.64□□□□□ -0.87
YBX3-215ENST00000544504 CNTD1Q8N815 330 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 TERB1Q8NA31 727 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 ATP11CQ8NB49 1132 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 GLIS1Q8NBF1 620 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 MCUQ8NE86 351 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 USP33Q8TEY7 942 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 HNRNPLLQ8WVV9 542 aaKnown RBP9.64□□□□□ -0.87
YBX3-215ENST00000544504 GDAP1L1Q96MZ0 367 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 NUDCD1Q96RS6 583 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 MGME1Q9BQP7 344 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 ETNK1Q9HBU6 452 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 HEBP1Q9NRV9 189 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 ELOVL2Q9NXB9 296 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 GRHL1Q9NZI5 618 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 FAM153AQ9UHL3 310 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 INTS6Q9UL03 887 aaKnown RBP9.64□□□□□ -0.87
YBX3-215ENST00000544504 NFU1Q9UMS0 254 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 FARP1Q9Y4F1 1045 aaPredicted RBP9.64□□□□□ -0.87
YBX3-215ENST00000544504 SHROOM3Q8TF72 1996 aa9.64□□□□□ -0.87
YBX3-215ENST00000544504 A0A1W2PQ67 120 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 TBC1D3BA6NDS4 549 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 SHISA7A6NL88 538 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 HRO43593 1189 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 ATP9BO43861 1147 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 SNAP91O60641 907 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 SUN1O94901 812 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 METTL18O95568 372 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 GSRP00390 522 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 EPOP01588 193 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 OPRD1P41143 372 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 TNFRSF4P43489 277 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 CXCL12P48061 93 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 CBLBQ13191 982 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 HIF1AQ16665 826 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 GAB4Q2WGN9 574 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 DNAJC21Q5F1R6 531 aaKnown RBP9.63□□□□□ -0.87
YBX3-215ENST00000544504 CENPUQ71F23 418 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 ADIPOR2Q86V24 386 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 SH2D3CQ8N5H7 860 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 NAT8LQ8N9F0 302 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 FBXO25Q8TCJ0 367 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 KCNV2Q8TDN2 545 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 LRRN4Q8WUT4 740 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 CPT1BQ92523 772 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 LRRC39Q96DD0 335 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 IMP4Q96G21 291 aaKnown RBP9.63□□□□□ -0.87
YBX3-215ENST00000544504 SEMA3CQ99985 751 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 P2RY13Q9BPV8 354 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 FSD1LQ9BXM9 530 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 CEP41Q9BYV8 373 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 CIPCQ9C0C6 399 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 ARFGAP3Q9NP61 516 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 SCUBE2Q9NQ36 999 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 ZDHHC18Q9NUE0 388 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 GTSE1Q9NYZ3 720 aa9.63□□□□□ -0.87
YBX3-215ENST00000544504 CLEC4EQ9ULY5 219 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms