RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 CLCNKBP51801 687 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 KCNA10Q16322 511 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 PACS1Q6VY07 963 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 OR8H2Q8N162 312 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 MAGEC3Q8TD91 643 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 TSPAN1O60635 241 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 FAM155BO75949 473 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 NUDT17P0C025 328 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 ELF3P78545 371 aaPredicted RBP12.89□□□□□ -0.35
CHD4-211ENST00000544484 ILF2Q12905 390 aaKnown RBP12.89□□□□□ -0.35
CHD4-211ENST00000544484 USP4Q13107 963 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 PMF1Q6P1K2 205 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 DHRSXQ8N5I4 330 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 OR4L1Q8NH43 312 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 CLEC4DQ8WXI8 215 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 NLNQ9BYT8 704 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 CD3EAPO15446 510 aaKnown RBP12.89□□□□□ -0.35
CHD4-211ENST00000544484 LINC00032P0C843 101 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 FKBP1BP68106 108 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 DGKKQ5KSL6 1271 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 GCNT7Q6ZNI0 430 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 PROX1Q92786 737 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 CLIP3Q96DZ5 547 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 DPEP3Q9H4B8 488 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 LRRC4CQ9HCJ2 640 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 SNX6Q9UNH7 406 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 ACTL7BQ9Y614 415 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 SOWAHBA6NEL2 793 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 LRCH4O75427 683 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 PSMG1O95456 288 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 UMPSP11172 480 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 COX4I1P13073 169 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 GTF2E2P29084 291 aaKnown RBP12.89□□□□□ -0.35
CHD4-211ENST00000544484 KCNJ2P63252 427 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 ALYREFQ86V81 257 aaKnown RBP12.89□□□□□ -0.35
CHD4-211ENST00000544484 EPHX4Q8IUS5 362 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 CHPFQ8IZ52 775 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 ZNF557Q8N988 423 aaPredicted RBP12.89□□□□□ -0.35
CHD4-211ENST00000544484 CENPTQ96BT3 561 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 DTNBP1Q96EV8 351 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 MRPL57Q9BQC6 102 aaKnown RBP12.89□□□□□ -0.35
CHD4-211ENST00000544484 ARMC7Q9H6L4 198 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 STK39Q9UEW8 545 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 MFSD11O43934 449 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 SNRPB2P08579 225 aaKnown RBP12.88□□□□□ -0.35
CHD4-211ENST00000544484 ARL2P36404 184 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 NOMO1Q15155 1222 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 ANKS1BQ7Z6G8 1248 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 CYP4Z2PQ8N1L4 340 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 ZNF276Q8N554 614 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 LINGO1Q96FE5 620 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 DHX33Q9H6R0 707 aaKnown RBP12.88□□□□□ -0.35
CHD4-211ENST00000544484 NEDD8-MDP1E9PL57 170 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 EPORP19235 508 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 TMED10P49755 219 aaKnown RBP12.88□□□□□ -0.35
CHD4-211ENST00000544484 FAM187BQ17R55 369 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 STRADAQ7RTN6 431 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 APTXQ7Z2E3 356 aaKnown RBP12.88□□□□□ -0.35
CHD4-211ENST00000544484 LRRC49Q8IUZ0 686 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 TMEM139Q8IV31 216 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 TBC1D10AQ9BXI6 508 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 BCL9LQ86UU0 1499 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 C15orf38-AP3S2A0A0A6YYH1 394 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 OR6C75A6NL08 312 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 MAPK8P45983 427 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 SPIDRQ14159 915 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 BRMS1LQ5PSV4 323 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 ZFP1Q6P2D0 407 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 RFWD3Q6PCD5 774 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 ARPINQ7Z6K5 226 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 CAMKK1Q8N5S9 505 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 MAGEE2Q8TD90 523 aaPredicted RBP12.88□□□□□ -0.35
CHD4-211ENST00000544484 ACAT2Q9BWD1 397 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 N6AMT1Q9Y5N5 214 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 KIF1AQ12756 1690 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 GLTPD2A6NH11 291 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 BMP10O95393 424 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 CD48P09326 243 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 CNPP09543 421 aaKnown RBP12.88□□□□□ -0.35
CHD4-211ENST00000544484 MAPKAPK3Q16644 382 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 CEP78Q5JTW2 689 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 FOXR2Q6PJQ5 311 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 KCTD15Q96SI1 283 aaPredicted RBP12.88□□□□□ -0.35
CHD4-211ENST00000544484 GLOD4Q9HC38 313 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 PNPOQ9NVS9 261 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 TMEM51Q9NW97 253 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 SALL4Q9UJQ4 1053 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 ANAPC2Q9UJX6 822 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 DERAQ9Y315 318 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 COL1A2P08123 1366 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 LRATO95237 230 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 XKR6Q5GH73 641 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 TRAF7Q6Q0C0 670 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 RINLQ6ZS11 566 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 NIFKQ9BYG3 293 aaKnown RBP12.88□□□□□ -0.35
CHD4-211ENST00000544484 CFAP97Q9P2B7 532 aa12.88□□□□□ -0.35
CHD4-211ENST00000544484 FAM47E-STBD1D6RA91 191 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 SMPD1P17405 629 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 SLC5A3P53794 718 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 FSTL1Q12841 308 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms