RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 SLC1A2P43004 574 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 SERPINH1P50454 418 aaKnown RBP13.82□□□□□ -0.2
HCFC2-202ENST00000544223 MSLNQ13421 630 aaPredicted RBP13.82□□□□□ -0.2
HCFC2-202ENST00000544223 CDH18Q13634 790 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 C5orf22Q49AR2 442 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 PPM1LQ5SGD2 360 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 OTOAQ7RTW8 1153 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 PPHLN1Q8NEY8 458 aaKnown RBP13.82□□□□□ -0.2
HCFC2-202ENST00000544223 OR13C4Q8NGS5 318 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 OR13J1Q8NGT2 312 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 RBBP8Q99708 897 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 FEM1AQ9BSK4 669 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 LINC00597Q9H2U6 94 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 DCTN4Q9UJW0 460 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 PLLPQ9Y342 182 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 A8MX80 341 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 LEFTY2O00292 366 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 GPR39O43194 453 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 PRAMEF12O95522 483 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 CD70P32970 193 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 CTSOP43234 321 aaPredicted RBP13.82□□□□□ -0.2
HCFC2-202ENST00000544223 GLRBP48167 497 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 SERPINB4P48594 390 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 YBEYP58557 167 aaPredicted RBP13.82□□□□□ -0.2
HCFC2-202ENST00000544223 MPP3Q13368 585 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 GPR158Q5T848 1215 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 N4BP2L1Q5TBK1 243 aaPredicted RBP13.82□□□□□ -0.2
HCFC2-202ENST00000544223 FAM219BQ5XKK7 198 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 ATG14Q6ZNE5 492 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 GRASPQ7Z6J2 395 aaPredicted RBP13.82□□□□□ -0.2
HCFC2-202ENST00000544223 SLC41A1Q8IVJ1 513 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 OTUD6BQ8N6M0 293 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 OR6P1Q8NGX9 317 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 NAT9Q9BTE0 207 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 MAGEH1Q9H213 219 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 NPHS2Q9NP85 383 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 ASAH2Q9NR71 780 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 MARCOQ9UEW3 520 aaPredicted RBP13.82□□□□□ -0.2
HCFC2-202ENST00000544223 RRP15Q9Y3B9 282 aaKnown RBP13.82□□□□□ -0.2
HCFC2-202ENST00000544223 SPO11Q9Y5K1 396 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 KDELR3O43731 214 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 KITP10721 976 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 GP5P40197 560 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 STK19P49842 368 aaPredicted RBP13.81□□□□□ -0.2
HCFC2-202ENST00000544223 CNSTQ6PJW8 725 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 Q6ZNB5 142 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 MFN1Q8IWA4 741 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 KLHDC8BQ8IXV7 354 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 TDRD5Q8NAT2 981 aaKnown RBP13.81□□□□□ -0.2
HCFC2-202ENST00000544223 IFT43Q96FT9 208 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 VPS39Q96JC1 886 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 MANSC1Q9H8J5 431 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 TMEM216Q9P0N5 145 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 MARCH4Q9P2E8 410 aaPredicted RBP13.81□□□□□ -0.2
HCFC2-202ENST00000544223 CPSF2Q9P2I0 782 aaKnown RBP13.81□□□□□ -0.2
HCFC2-202ENST00000544223 MOSPD3O75425 235 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 TMCC1O94876 653 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 WEE1P30291 646 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 LGSNQ5TDP6 509 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 PSRC1Q6PGN9 363 aaPredicted RBP13.81□□□□□ -0.2
HCFC2-202ENST00000544223 LRRC49Q8IUZ0 686 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 CCNJLQ8IV13 435 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 CEP97Q8IW35 865 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 CCDC197Q8NCU1 140 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 RFWD2Q8NHY2 731 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 HERVK_113Q902F9 699 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 HDAC10Q969S8 669 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 RMDN1Q96DB5 314 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 ERLEC1Q96DZ1 483 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 DNAJC1Q96KC8 554 aaKnown RBP13.81□□□□□ -0.2
HCFC2-202ENST00000544223 TNKS2Q9H2K2 1166 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 BPIFA1Q9NP55 256 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 VPS51Q9UID3 782 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 TBC1D30Q9Y2I9 924 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 SH3BP1Q9Y3L3 701 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 NUMBLQ9Y6R0 609 aa13.81□□□□□ -0.2
HCFC2-202ENST00000544223 MTCL1Q9Y4B5 1905 aaKnown RBP13.8□□□□□ -0.2
HCFC2-202ENST00000544223 RFXAPO00287 272 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 LYPLA1O75608 230 aaPredicted RBP13.8□□□□□ -0.2
HCFC2-202ENST00000544223 OLFM2O95897 454 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 GSRP00390 522 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 RHOP08100 348 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 CDK18Q07002 472 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 SHHQ15465 462 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 PABPC1LQ4VXU2 614 aaKnown RBP13.8□□□□□ -0.2
HCFC2-202ENST00000544223 RBM20Q5T481 1227 aaKnown RBP13.8□□□□□ -0.2
HCFC2-202ENST00000544223 C6orf89Q6UWU4 347 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 SPATA21Q7Z572 469 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 TMEM25Q86YD3 366 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 NAT16Q8N8M0 369 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 GPATCH11Q8N954 259 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 SP7Q8TDD2 431 aaPredicted RBP13.8□□□□□ -0.2
HCFC2-202ENST00000544223 TBATAQ96M53 351 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 CPNE1Q99829 537 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 EMILIN2Q9BXX0 1053 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 TREX1Q9NSU2 369 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 ILVBLA1L0T0 632 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 TM9SF1O15321 606 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 CHI3L2Q15782 390 aa13.8□□□□□ -0.2
HCFC2-202ENST00000544223 EFHBQ8N7U6 833 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms