RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 TRIM11Q96F44 468 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 TBATAQ96M53 351 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 NCAPGQ9BPX3 1015 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 EDEM3Q9BZQ6 932 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 KLC2Q9H0B6 622 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 DNAJC28Q9NX36 388 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 NCKIPSDQ9NZQ3 722 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 LHX3Q9UBR4 397 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 GGT7Q9UJ14 662 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 ITM2BQ9Y287 266 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 SCINQ9Y6U3 715 aa15.83■□□□□ 0.12
VPS33A-206ENST00000542310 A0A087WV48 116 aa15.82■□□□□ 0.12
VPS33A-206ENST00000542310 FFAR2O15552 330 aa15.82■□□□□ 0.12
VPS33A-206ENST00000542310 DUSP3P51452 185 aaPredicted RBP15.82■□□□□ 0.12
VPS33A-206ENST00000542310 INSM1Q01101 510 aaPredicted RBP15.82■□□□□ 0.12
VPS33A-206ENST00000542310 ELP6Q0PNE2 266 aa15.82■□□□□ 0.12
VPS33A-206ENST00000542310 TARDBPQ13148 414 aaKnown RBP eCLIP15.82■□□□□ 0.12
VPS33A-206ENST00000542310 PDE1CQ14123 709 aaPredicted RBP15.82■□□□□ 0.12
VPS33A-206ENST00000542310 PTK2BQ14289 1009 aa15.82■□□□□ 0.12
VPS33A-206ENST00000542310 FIGNQ5HY92 759 aa15.82■□□□□ 0.12
VPS33A-206ENST00000542310 DCBLD1Q8N8Z6 715 aa15.82■□□□□ 0.12
VPS33A-206ENST00000542310 CXorf40AQ8TE69 158 aa15.82■□□□□ 0.12
VPS33A-206ENST00000542310 BTN2A2Q8WVV5 523 aa15.82■□□□□ 0.12
VPS33A-206ENST00000542310 TUBGCP5Q96RT8 1024 aa15.82■□□□□ 0.12
VPS33A-206ENST00000542310 SNRNP25Q9BV90 132 aaKnown RBP15.82■□□□□ 0.12
VPS33A-206ENST00000542310 HAUS4Q9H6D7 363 aa15.82■□□□□ 0.12
VPS33A-206ENST00000542310 CLCA2Q9UQC9 943 aa15.82■□□□□ 0.12
VPS33A-206ENST00000542310 TMEM191CA6NGB0 347 aa15.81■□□□□ 0.12
VPS33A-206ENST00000542310 ARHGAP42A6NI28 874 aa15.81■□□□□ 0.12
VPS33A-206ENST00000542310 EEF2KO00418 725 aaKnown RBP15.81■□□□□ 0.12
VPS33A-206ENST00000542310 ATMINO43313 823 aaPredicted RBP15.81■□□□□ 0.12
VPS33A-206ENST00000542310 LZTS3O60299 673 aaPredicted RBP15.81■□□□□ 0.12
VPS33A-206ENST00000542310 PRAMEF11O60813 436 aa15.81■□□□□ 0.12
VPS33A-206ENST00000542310 TM7SF2O76062 418 aa15.81■□□□□ 0.12
VPS33A-206ENST00000542310 RNF8O76064 485 aa15.81■□□□□ 0.12
VPS33A-206ENST00000542310 MYBL1P10243 752 aa15.81■□□□□ 0.12
VPS33A-206ENST00000542310 IGFALSP35858 605 aa15.81■□□□□ 0.12
VPS33A-206ENST00000542310 ZNF165P49910 485 aa15.81■□□□□ 0.12
VPS33A-206ENST00000542310 YPEL5P62699 121 aa15.81■□□□□ 0.12
VPS33A-206ENST00000542310 ITPR1Q14643 2758 aa15.81■□□□□ 0.12
VPS33A-206ENST00000542310 ERMARDQ5T6L9 678 aa15.81■□□□□ 0.12
VPS33A-206ENST00000542310 ZCCHC8Q6NZY4 707 aaKnown RBP15.81■□□□□ 0.12
VPS33A-206ENST00000542310 BRAT1Q6PJG6 821 aa15.81■□□□□ 0.12
VPS33A-206ENST00000542310 ZNF571Q7Z3V5 609 aaPredicted RBP15.81■□□□□ 0.12
VPS33A-206ENST00000542310 TTC7BQ86TV6 843 aa15.81■□□□□ 0.12
VPS33A-206ENST00000542310 COL27A1Q8IZC6 1860 aaPredicted RBP15.81■□□□□ 0.12
VPS33A-206ENST00000542310 CENPTQ96BT3 561 aa15.81■□□□□ 0.12
VPS33A-206ENST00000542310 APOLD1Q96LR9 279 aa15.81■□□□□ 0.12
VPS33A-206ENST00000542310 ZNF641Q96N77 438 aaPredicted RBP15.81■□□□□ 0.12
VPS33A-206ENST00000542310 DHX35Q9H5Z1 703 aaKnown RBP15.81■□□□□ 0.12
VPS33A-206ENST00000542310 IPO11Q9UI26 975 aaKnown RBP15.81■□□□□ 0.12
VPS33A-206ENST00000542310 RALYQ9UKM9 306 aaKnown RBP15.81■□□□□ 0.12
VPS33A-206ENST00000542310 TMCO5BA8MYB1 307 aa15.8■□□□□ 0.12
VPS33A-206ENST00000542310 K7ESM1 405 aa15.8■□□□□ 0.12
VPS33A-206ENST00000542310 TPP1O14773 563 aa15.8■□□□□ 0.12
VPS33A-206ENST00000542310 PRPSAP2O60256 369 aa15.8■□□□□ 0.12
VPS33A-206ENST00000542310 CSNK1DP48730 415 aa15.8■□□□□ 0.12
VPS33A-206ENST00000542310 CLDN6P56747 220 aa15.8■□□□□ 0.12
VPS33A-206ENST00000542310 KLHL30Q0D2K2 578 aa15.8■□□□□ 0.12
VPS33A-206ENST00000542310 RFTN1Q14699 578 aaPredicted RBP15.8■□□□□ 0.12
VPS33A-206ENST00000542310 ACAP1Q15027 740 aa15.8■□□□□ 0.12
VPS33A-206ENST00000542310 CYTH1Q15438 398 aa15.8■□□□□ 0.12
VPS33A-206ENST00000542310 TMEM52BQ4KMG9 183 aa15.8■□□□□ 0.12
VPS33A-206ENST00000542310 AFMIDQ63HM1 303 aa15.8■□□□□ 0.12
VPS33A-206ENST00000542310 E4F1Q66K89 784 aaPredicted RBP15.8■□□□□ 0.12
VPS33A-206ENST00000542310 CAVIN1Q6NZI2 390 aaKnown RBP15.8■□□□□ 0.12
VPS33A-206ENST00000542310 MACC1Q6ZN28 852 aa15.8■□□□□ 0.12
VPS33A-206ENST00000542310 RFX8Q6ZV50 586 aa15.8■□□□□ 0.12
VPS33A-206ENST00000542310 CYP4V2Q6ZWL3 525 aaPredicted RBP15.8■□□□□ 0.12
VPS33A-206ENST00000542310 TP53I13Q8NBR0 393 aaPredicted RBP15.8■□□□□ 0.12
VPS33A-206ENST00000542310 PEBP4Q96S96 227 aa15.8■□□□□ 0.12
VPS33A-206ENST00000542310 FUCA2Q9BTY2 467 aa15.8■□□□□ 0.12
VPS33A-206ENST00000542310 MRPL47Q9HD33 250 aaKnown RBP15.8■□□□□ 0.12
VPS33A-206ENST00000542310 CNOT8Q9UFF9 292 aaKnown RBP15.8■□□□□ 0.12
VPS33A-206ENST00000542310 LY6G6EA0A0G2JKS1 128 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 DDX3XO00571 662 aaKnown RBP eCLIP15.79■□□□□ 0.128e-17■■■□□ 15.5
VPS33A-206ENST00000542310 AQP9O43315 295 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 PIGNO95427 931 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 FTLP02792 175 aaPredicted RBP15.79■□□□□ 0.12
VPS33A-206ENST00000542310 TIMP2P16035 220 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 JUNDP17535 347 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 XPAP23025 273 aaPredicted RBP15.79■□□□□ 0.12
VPS33A-206ENST00000542310 MIPP30301 263 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 PCK1P35558 622 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 HCAR3P49019 387 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 THOP1P52888 689 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 EIF2B5Q13144 721 aaKnown RBP15.79■□□□□ 0.12
VPS33A-206ENST00000542310 IQCB1Q15051 598 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 AGERQ15109 404 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 COL28A1Q2UY09 1125 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 ZNF542PQ5EBM4 170 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 CDCP2Q5VXM1 449 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 ARFGAP1Q8N6T3 406 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 SNIP1Q8TAD8 396 aaKnown RBP15.79■□□□□ 0.12
VPS33A-206ENST00000542310 ZNF653Q96CK0 615 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 EXOC2Q96KP1 924 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 KCTD15Q96SI1 283 aaPredicted RBP15.79■□□□□ 0.12
VPS33A-206ENST00000542310 SUV39H2Q9H5I1 410 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 GPATCH2LQ9NWQ4 482 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 SPASTQ9UBP0 616 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms