RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 ZNF12P17014 697 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 ADD2P35612 726 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 RAD52P43351 418 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 MTNR1AP48039 350 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 AMTP48728 403 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 PDLIM4P50479 330 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 CDH12P55289 794 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 TMPRSS3P57727 454 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 SEC61A1P61619 476 aaKnown RBP3.78□□□□□ -1.8
LEMD3-204ENST00000542032 PRKG2Q13237 762 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 NFATC4Q14934 902 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 TAF11Q15544 211 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 RPE65Q16518 533 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 TMEM268Q5VZI3 342 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 ITPRIPL1Q6GPH6 555 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 FASTKD5Q7L8L6 764 aaKnown RBP3.78□□□□□ -1.8
LEMD3-204ENST00000542032 HERC6Q8IVU3 1022 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 CHCHD4Q8N4Q1 142 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 ZBTB8BQ8NAP8 495 aaPredicted RBP3.78□□□□□ -1.8
LEMD3-204ENST00000542032 LMO3Q8TAP4 145 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 THAP4Q8WY91 577 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 RSPH1Q8WYR4 309 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 LTV1Q96GA3 475 aaPredicted RBP3.78□□□□□ -1.8
LEMD3-204ENST00000542032 UNC45AQ9H3U1 944 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 RETREG1Q9H6L5 497 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 HDAC6Q9UBN7 1215 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 FBXO40Q9UH90 709 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 TMEM98Q9Y2Y6 226 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 CLDN16Q9Y5I7 305 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 NOTCH4Q99466 2003 aa3.78□□□□□ -1.8
LEMD3-204ENST00000542032 TRIP12Q14669 1992 aaPredicted RBP3.78□□□□□ -1.8
LEMD3-204ENST00000542032 IGHV4-28A0A0C4DH34 117 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 TARSL2A2RTX5 802 aaKnown RBP3.77□□□□□ -1.81
LEMD3-204ENST00000542032 SYN3O14994 580 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 IRAK2O43187 625 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 HOXC11O43248 304 aaPredicted RBP3.77□□□□□ -1.81
LEMD3-204ENST00000542032 TIPRLO75663 272 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 FCGR1AP12314 374 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 KRT9P35527 623 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 ART1P52961 327 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 NUDT6P53370 316 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 KRTAP10-5P60370 271 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 TRAF2Q12933 501 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 ZNF484Q5JVG2 852 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 FBXO47Q5MNV8 452 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 SPATA1Q5VX52 437 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 PRSS57Q6UWY2 283 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 C4orf50Q6ZRC1 276 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 TMC8Q8IU68 726 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 FTSJ3Q8IY81 847 aaKnown RBP3.77□□□□□ -1.81
LEMD3-204ENST00000542032 ANKRD52Q8NB46 1076 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 OR4N2Q8NGD1 307 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 FAM216AQ8WUB2 273 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 HERVK_113Q902F9 699 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 HTRA1Q92743 480 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 TSPAN18Q96SJ8 248 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 AP1M1Q9BXS5 423 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 TM6SF1Q9BZW5 370 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 TAF1DQ9H5J8 278 aaPredicted RBP3.77□□□□□ -1.81
LEMD3-204ENST00000542032 ACAD9Q9H845 621 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 RMI1Q9H9A7 625 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 ZNF556Q9HAH1 456 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 SH3GLB2Q9NR46 395 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 KIF17Q9P2E2 1029 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 AASSQ9UDR5 926 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 FEM1BQ9UK73 627 aa3.77□□□□□ -1.81
LEMD3-204ENST00000542032 SRPRBQ9Y5M8 271 aaKnown RBP3.77□□□□□ -1.81
LEMD3-204ENST00000542032 FAM170AA1A519 330 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 OR6C68A6NDL8 312 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 DDTLA6NHG4 134 aaPredicted RBP3.76□□□□□ -1.81
LEMD3-204ENST00000542032 HMX3A6NHT5 357 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 AHCYL1O43865 530 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 KIF1CO43896 1103 aaKnown RBP3.76□□□□□ -1.81
LEMD3-204ENST00000542032 DDX58O95786 925 aaKnown RBP3.76□□□□□ -1.81
LEMD3-204ENST00000542032 MMP3P08254 477 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 NAGAP17050 411 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 MT3P25713 68 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 DPP6P42658 865 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 CCR5P51681 352 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 DCAF7P61962 342 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 ARHGAP8P85298 464 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 ADORA2A-AS1P86434 159 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 C9orf57Q5W0N0 161 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 FAM205BPQ63HN1 556 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 GJB7Q6PEY0 223 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 CASC1Q6TDU7 716 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 SYNE3Q6ZMZ3 975 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.76□□□□□ -1.81
LEMD3-204ENST00000542032 Q6ZTC4 211 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 NEK10Q6ZWH5 1172 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 C16orf82Q7Z2V1 217 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 ARMC9Q7Z3E5 817 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 LSMEM1Q8N8F7 131 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 SETD9Q8NE22 299 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 CSGALNACT1Q8TDX6 532 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 TMEM18Q96B42 140 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 CDT1Q9H211 546 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 IL25Q9H293 177 aa3.76□□□□□ -1.81
LEMD3-204ENST00000542032 C6orf106Q9H6K1 298 aaPredicted RBP3.76□□□□□ -1.81
LEMD3-204ENST00000542032 SAYSD1Q9NPB0 183 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms