RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 IL11RAQ14626 422 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 LRRC24Q50LG9 513 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 CYP4A22Q5TCH4 519 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 CD276Q5ZPR3 534 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 ZNF385CQ66K41 422 aaPredicted RBP5.67□□□□□ -1.5
DDB1-219ENST00000541513 OTUD7BQ6GQQ9 843 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 PM20D1Q6GTS8 502 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 CENPPQ6IPU0 288 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 CDPF1Q6NVV7 123 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 ARHGAP11AQ6P4F7 1023 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 LRSAM1Q6UWE0 723 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 TAS1R1Q7RTX1 841 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 TLK2Q86UE8 772 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 FBXO11Q86XK2 927 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 DMRTC2Q8IXT2 367 aaPredicted RBP5.67□□□□□ -1.5
DDB1-219ENST00000541513 MYOCDQ8IZQ8 938 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 Q8N3U1 123 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 SFRP1Q8N474 314 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 RBM15BQ8NDT2 890 aaKnown RBP5.67□□□□□ -1.5
DDB1-219ENST00000541513 ABHD5Q8WTS1 349 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 WASF1Q92558 559 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 PRCCQ92733 491 aaPredicted RBP5.67□□□□□ -1.5
DDB1-219ENST00000541513 INTS4Q96HW7 963 aaKnown RBP5.67□□□□□ -1.5
DDB1-219ENST00000541513 DYDC2Q96IM9 177 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 ZNF668Q96K58 619 aaPredicted RBP5.67□□□□□ -1.5
DDB1-219ENST00000541513 CRAMP1Q96RY5 1269 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 CCDC106Q9BWC9 280 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 LDAHQ9H6V9 325 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 MAGEE1Q9HCI5 957 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 INTS13Q9NVM9 706 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 FBXO34Q9NWN3 711 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 ALKBH4Q9NXW9 302 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 LMCD1Q9NZU5 365 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 TNFRSF10DQ9UBN6 386 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 VPS51Q9UID3 782 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 DDX19BQ9UMR2 479 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 MRPL11Q9Y3B7 192 aaKnown RBP5.67□□□□□ -1.5
DDB1-219ENST00000541513 LIPGQ9Y5X9 500 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 CDY1Q9Y6F8 540 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 SALL3Q9BXA9 1300 aa5.67□□□□□ -1.5
DDB1-219ENST00000541513 LTBP1Q14766 1721 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 A0A087WV48 116 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 A0A0G2JLW4 131 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 A0A1W2PQ45 241 aaPredicted RBP5.66□□□□□ -1.5
DDB1-219ENST00000541513 A0A1W2PQY0 241 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 OOEPA6NGQ2 149 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 MBD3L5A6NJ08 208 aaPredicted RBP5.66□□□□□ -1.5
DDB1-219ENST00000541513 BTBD18B2RXH4 712 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 SLC33A1O00400 549 aaPredicted RBP5.66□□□□□ -1.5
DDB1-219ENST00000541513 SYN3O14994 580 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 ADAMDEC1O15204 470 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 LEFTY1O75610 366 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 ZFYP08048 801 aaPredicted RBP5.66□□□□□ -1.5
DDB1-219ENST00000541513 NFICP08651 508 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 SBK3P0C264 359 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 UBTFL1P0CB47 393 aaPredicted RBP5.66□□□□□ -1.5
DDB1-219ENST00000541513 GHRP10912 638 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 CHN1P15882 459 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 ZNF8P17098 575 aaPredicted RBP5.66□□□□□ -1.5
DDB1-219ENST00000541513 FPR1P21462 350 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 CHRNA5P30532 468 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 ALDH1B1P30837 517 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 CCR3P51677 355 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 EPHB3P54753 998 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 MFAP4P55083 255 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 ADARP55265 1226 aaKnown RBP5.66□□□□□ -1.5
DDB1-219ENST00000541513 SARNPP82979 210 aaKnown RBP5.66□□□□□ -1.5
DDB1-219ENST00000541513 ABHD18Q0P651 414 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 CHIT1Q13231 466 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 SP140Q13342 867 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 COL9A3Q14050 684 aaPredicted RBP5.66□□□□□ -1.5
DDB1-219ENST00000541513 MVPQ14764 893 aaKnown RBP5.66□□□□□ -1.5
DDB1-219ENST00000541513 STILQ15468 1287 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 FUT11Q495W5 492 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 CCDC152Q4G0S7 254 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 FBLN7Q53RD9 439 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 SGO2Q562F6 1265 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 C20orf194Q5TEA3 1177 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 GKAP1Q5VSY0 366 aaPredicted RBP5.66□□□□□ -1.5
DDB1-219ENST00000541513 KRT79Q5XKE5 535 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 KANK2Q63ZY3 851 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 MSANTD2Q6P1R3 559 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 C15orf39Q6ZRI6 1047 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 C8orf86Q6ZUL3 223 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 MED25Q71SY5 747 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 MARK2Q7KZI7 788 aaKnown RBP5.66□□□□□ -1.5
DDB1-219ENST00000541513 SLCO6A1Q86UG4 719 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 ITPRIPQ8IWB1 547 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 VPS52Q8N1B4 723 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 LILRA3Q8N6C8 439 aaPredicted RBP5.66□□□□□ -1.5
DDB1-219ENST00000541513 TTLL6Q8N841 843 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 IQUBQ8NA54 791 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 SMARCE1Q969G3 411 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 MRPL38Q96DV4 380 aaKnown RBP5.66□□□□□ -1.5
DDB1-219ENST00000541513 ARSGQ96EG1 525 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 DTNBP1Q96EV8 351 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 KAZALD1Q96I82 304 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 HEXIM2Q96MH2 286 aaKnown RBP5.66□□□□□ -1.5
DDB1-219ENST00000541513 WDFY2Q96P53 400 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 RBM14Q96PK6 669 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms