RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 EFSO43281 561 aa27.16■■□□□ 1.94
CHFR-218ENST00000540963 SLC5A2P31639 672 aa27.16■■□□□ 1.94
CHFR-218ENST00000540963 MYLK3Q32MK0 819 aa27.16■■□□□ 1.94
CHFR-218ENST00000540963 RAB11FIP2Q7L804 512 aa27.16■■□□□ 1.94
CHFR-218ENST00000540963 VPS36Q86VN1 386 aa27.16■■□□□ 1.94
CHFR-218ENST00000540963 MSANTD4Q8NCY6 345 aa27.16■■□□□ 1.94
CHFR-218ENST00000540963 FAM117AQ9C073 453 aa27.16■■□□□ 1.94
CHFR-218ENST00000540963 MAGEH1Q9H213 219 aa27.16■■□□□ 1.94
CHFR-218ENST00000540963 TMEM59LQ9UK28 342 aa27.16■■□□□ 1.94
CHFR-218ENST00000540963 AJAP1Q9UKB5 411 aaPredicted RBP27.16■■□□□ 1.94
CHFR-218ENST00000540963 DOLKQ9UPQ8 538 aa27.16■■□□□ 1.94
CHFR-218ENST00000540963 HEMK1Q9Y5R4 338 aaPredicted RBP27.16■■□□□ 1.94
CHFR-218ENST00000540963 HECTD1Q9ULT8 2610 aa27.16■■□□□ 1.94
CHFR-218ENST00000540963 BOD1L1Q8NFC6 3051 aa27.15■■□□□ 1.94
CHFR-218ENST00000540963 UGT2B4P06133 528 aa27.15■■□□□ 1.94
CHFR-218ENST00000540963 GKP32189 559 aa27.15■■□□□ 1.94
CHFR-218ENST00000540963 CCKBRP32239 447 aa27.15■■□□□ 1.94
CHFR-218ENST00000540963 ACVRL1P37023 503 aa27.15■■□□□ 1.94
CHFR-218ENST00000540963 SUOXP51687 545 aa27.15■■□□□ 1.94
CHFR-218ENST00000540963 C1QBPQ07021 282 aaKnown RBP27.15■■□□□ 1.94
CHFR-218ENST00000540963 MANEALQ5VSG8 457 aa27.15■■□□□ 1.94
CHFR-218ENST00000540963 PRICKLE2Q7Z3G6 844 aa27.15■■□□□ 1.94
CHFR-218ENST00000540963 TTC7BQ86TV6 843 aa27.15■■□□□ 1.94
CHFR-218ENST00000540963 FAM131BQ86XD5 332 aa27.15■■□□□ 1.94
CHFR-218ENST00000540963 TP53I13Q8NBR0 393 aaPredicted RBP27.15■■□□□ 1.94
CHFR-218ENST00000540963 OR6K2Q8NGY2 324 aa27.15■■□□□ 1.94
CHFR-218ENST00000540963 SGF29Q96ES7 293 aa27.15■■□□□ 1.94
CHFR-218ENST00000540963 KLHL32Q96NJ5 620 aa27.15■■□□□ 1.94
CHFR-218ENST00000540963 TMEM74Q96NL1 305 aa27.15■■□□□ 1.94
CHFR-218ENST00000540963 GFM1Q96RP9 751 aaKnown RBP27.15■■□□□ 1.94
CHFR-218ENST00000540963 ACTL7AQ9Y615 435 aa27.15■■□□□ 1.94
CHFR-218ENST00000540963 ZSCAN5CA6NGD5 496 aaPredicted RBP27.14■■□□□ 1.94
CHFR-218ENST00000540963 CYSRT1A8MQ03 144 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 D6RAR5 112 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 LSM8O95777 96 aaKnown RBP27.14■■□□□ 1.94
CHFR-218ENST00000540963 SFTPCP11686 197 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 RHOQP17081 205 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 UGT1A5P35504 534 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 HK3P52790 923 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 INHBCP55103 352 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 RAD51Q06609 339 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 TRNP1Q6NT89 227 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 GDPD4Q6W3E5 623 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 NLRP14Q86W24 1093 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 CREBRFQ8IUR6 639 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 EXD3Q8N9H8 876 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 CXorf40AQ8TE69 158 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 CFAP57Q96MR6 1250 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 EPAS1Q99814 870 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 SYNDIG1Q9H7V2 258 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 TMEM248Q9NWD8 314 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 DKK3Q9UBP4 350 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 OR12D3Q9UGF7 316 aa27.14■■□□□ 1.94
CHFR-218ENST00000540963 LRP4O75096 1905 aa27.14■■□□□ 1.93
CHFR-218ENST00000540963 UNC13CQ8NB66 2214 aa27.13■■□□□ 1.93
CHFR-218ENST00000540963 NVLO15381 856 aaKnown RBP27.13■■□□□ 1.93
CHFR-218ENST00000540963 CYP11B1P15538 503 aa27.13■■□□□ 1.93
CHFR-218ENST00000540963 NFATC3Q12968 1075 aa27.13■■□□□ 1.93
CHFR-218ENST00000540963 LINC00303Q3SY05 128 aa27.13■■□□□ 1.93
CHFR-218ENST00000540963 USP53Q70EK8 1073 aa27.13■■□□□ 1.93
CHFR-218ENST00000540963 CASKIN2Q8WXE0 1202 aa27.13■■□□□ 1.93
CHFR-218ENST00000540963 TMEM159Q96B96 161 aa27.13■■□□□ 1.93
CHFR-218ENST00000540963 EDEM3Q9BZQ6 932 aa27.13■■□□□ 1.93
CHFR-218ENST00000540963 EPB41L5Q9HCM4 733 aa27.13■■□□□ 1.93
CHFR-218ENST00000540963 GULP1Q9UBP9 304 aa27.13■■□□□ 1.93
CHFR-218ENST00000540963 IL17BQ9UHF5 180 aa27.13■■□□□ 1.93
CHFR-218ENST00000540963 MFHAS1Q9Y4C4 1052 aa27.13■■□□□ 1.93
CHFR-218ENST00000540963 PYCARD-AS1I3L0S3 204 aa27.12■■□□□ 1.93
CHFR-218ENST00000540963 CASC3O15234 703 aaKnown RBP27.12■■□□□ 1.93
CHFR-218ENST00000540963 NOBOXO60393 691 aa27.12■■□□□ 1.93
CHFR-218ENST00000540963 MMP20O60882 483 aa27.12■■□□□ 1.93
CHFR-218ENST00000540963 LIPCP11150 499 aa27.12■■□□□ 1.93
CHFR-218ENST00000540963 PRKCSHP14314 528 aaPredicted RBP27.12■■□□□ 1.93
CHFR-218ENST00000540963 B3GNT8Q7Z7M8 397 aa27.12■■□□□ 1.93
CHFR-218ENST00000540963 GKN2Q86XP6 184 aa27.12■■□□□ 1.93
CHFR-218ENST00000540963 IRF2BP1Q8IU81 584 aa27.12■■□□□ 1.93
CHFR-218ENST00000540963 PCDH19Q8TAB3 1148 aa27.12■■□□□ 1.93
CHFR-218ENST00000540963 CCDC74AQ96AQ1 378 aa27.12■■□□□ 1.93
CHFR-218ENST00000540963 GDAP1L1Q96MZ0 367 aa27.12■■□□□ 1.93
CHFR-218ENST00000540963 MBNL1Q9NR56 388 aaKnown RBP27.12■■□□□ 1.93
CHFR-218ENST00000540963 STARD5Q9NSY2 213 aa27.12■■□□□ 1.93
CHFR-218ENST00000540963 NDFIP2Q9NV92 336 aa27.12■■□□□ 1.93
CHFR-218ENST00000540963 LRRK1Q38SD2 2015 aa27.11■■□□□ 1.93
CHFR-218ENST00000540963 RASGRP1O95267 797 aa27.11■■□□□ 1.93
CHFR-218ENST00000540963 PNMA6AP0CW24 399 aaPredicted RBP27.11■■□□□ 1.93
CHFR-218ENST00000540963 CTSEP14091 401 aa27.11■■□□□ 1.93
CHFR-218ENST00000540963 HTR1BP28222 390 aa27.11■■□□□ 1.93
CHFR-218ENST00000540963 ADRA1BP35368 520 aa27.11■■□□□ 1.93
CHFR-218ENST00000540963 KLHL40Q2TBA0 621 aa27.11■■□□□ 1.93
CHFR-218ENST00000540963 KYQ8NBH2 561 aa27.11■■□□□ 1.93
CHFR-218ENST00000540963 SEMA3CQ99985 751 aa27.11■■□□□ 1.93
CHFR-218ENST00000540963 TTYH3Q9C0H2 523 aa27.11■■□□□ 1.93
CHFR-218ENST00000540963 SEPT10Q9P0V9 454 aa27.11■■□□□ 1.93
CHFR-218ENST00000540963 RABGEF1Q9UJ41 708 aa27.11■■□□□ 1.93
CHFR-218ENST00000540963 KDELR3O43731 214 aa27.1■■□□□ 1.93
CHFR-218ENST00000540963 RAMP2O60895 175 aa27.1■■□□□ 1.93
CHFR-218ENST00000540963 ELP6Q0PNE2 266 aa27.1■■□□□ 1.93
CHFR-218ENST00000540963 TMEM52BQ4KMG9 183 aa27.1■■□□□ 1.93
CHFR-218ENST00000540963 INO80DQ53TQ3 878 aaPredicted RBP27.1■■□□□ 1.93
CHFR-218ENST00000540963 JAMLQ86YT9 394 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms