RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 SHROOM3Q8TF72 1996 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 SMIM35A0A1B0GVV1 85 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 TRIM24O15164 1050 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 TRPA1O75762 1119 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 IGFBP6P24592 240 aaPredicted RBP12.41□□□□□ -0.42
NPC1-202ENST00000540608 CCNCP24863 283 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 TXNL4AP83876 142 aaKnown RBP12.41□□□□□ -0.42
NPC1-202ENST00000540608 SULT2A1Q06520 285 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 SQLEQ14534 574 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 DENND5AQ6IQ26 1287 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 POTEHQ6S545 545 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.41□□□□□ -0.42
NPC1-202ENST00000540608 PPHLN1Q8NEY8 458 aaKnown RBP12.41□□□□□ -0.42
NPC1-202ENST00000540608 PTCD2Q8WV60 388 aaKnown RBP12.41□□□□□ -0.42
NPC1-202ENST00000540608 DNAJB3Q8WWF6 145 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 DUS3LQ96G46 650 aaKnown RBP12.41□□□□□ -0.42
NPC1-202ENST00000540608 ELMO2Q96JJ3 720 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 PCDHAC1Q9H158 963 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 OSBPL2Q9H1P3 480 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 MEAF6Q9HAF1 191 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 MRM3Q9HC36 420 aaKnown RBP12.41□□□□□ -0.42
NPC1-202ENST00000540608 CACNA2D2Q9NY47 1150 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.41□□□□□ -0.42
NPC1-202ENST00000540608 RNF11Q9Y3C5 154 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 DYNC1LI2O43237 492 aaPredicted RBP12.41□□□□□ -0.42
NPC1-202ENST00000540608 ANXA9O76027 345 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 MT-CYBP00156 380 aaPredicted RBP12.41□□□□□ -0.42
NPC1-202ENST00000540608 HNRNPLP14866 589 aaKnown RBP eCLIP12.41□□□□□ -0.426e-6■□□□□ 11.3
NPC1-202ENST00000540608 INHBCP55103 352 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 POU4F1Q01851 419 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 IKBKEQ14164 716 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 PSMD5Q16401 504 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 PAOXQ6QHF9 649 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 AMIGO2Q86SJ2 522 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 ARRDC4Q8NCT1 418 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 C2CD4AQ8NCU7 369 aaPredicted RBP12.41□□□□□ -0.42
NPC1-202ENST00000540608 ZMIZ2Q8NF64 920 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 HMGCLL1Q8TB92 370 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 GTF3C2Q8WUA4 911 aaPredicted RBP12.41□□□□□ -0.42
NPC1-202ENST00000540608 SGF29Q96ES7 293 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 MS4A4AQ96JQ5 239 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 DNAJC1Q96KC8 554 aaKnown RBP12.41□□□□□ -0.42
NPC1-202ENST00000540608 TINF2Q9BSI4 451 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 HAUS8Q9BT25 410 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 OSBPL11Q9BXB4 747 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 UNKQ9C0B0 810 aaKnown RBP12.41□□□□□ -0.42
NPC1-202ENST00000540608 ABHD16BQ9H3Z7 469 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 EML4Q9HC35 981 aaKnown RBP12.41□□□□□ -0.42
NPC1-202ENST00000540608 TRPC7Q9HCX4 862 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 TIMMDC1Q9NPL8 285 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 CEPT1Q9Y6K0 416 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 FNDC1Q4ZHG4 1894 aaPredicted RBP12.4□□□□□ -0.42
NPC1-202ENST00000540608 H3BSA7 217 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 PSMD12O00232 456 aaPredicted RBP12.4□□□□□ -0.42
NPC1-202ENST00000540608 FBP2O00757 339 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 EPHX2P34913 555 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 SLC1A2P43004 574 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 CD151P48509 253 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 NRF1Q16656 503 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 PRAMEF19Q5SWL8 479 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 REP15Q6BDI9 236 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 AFAP1L2Q8N4X5 818 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 TSPAN14Q8NG11 270 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 NPLOC4Q8TAT6 608 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 LRTOMTQ8WZ04 291 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 IRGQQ8WZA9 623 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 LPGAT1Q92604 370 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 SLCO4A1Q96BD0 722 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 CCDC126Q96EE4 140 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 SEMA6AQ9H2E6 1030 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 IGSF5Q9NSI5 407 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 DDX18Q9NVP1 670 aaKnown RBP12.4□□□□□ -0.42
NPC1-202ENST00000540608 HACD3Q9P035 362 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 TCAF1Q9Y4C2 921 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 IPPQ9Y573 584 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 ZNF236Q9UL36 1845 aa12.4□□□□□ -0.42
NPC1-202ENST00000540608 TCRBV3S1A0A5B6 114 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 HEATR9A2RTY3 570 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 MBLAC1A4D2B0 266 aaPredicted RBP12.4□□□□□ -0.43
NPC1-202ENST00000540608 UBDO15205 165 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 SLC7A1P30825 629 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 SLC12A2P55011 1212 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 FASTKQ14296 549 aaKnown RBP12.4□□□□□ -0.43
NPC1-202ENST00000540608 GRB14Q14449 540 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 SNX17Q15036 470 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 USP50Q70EL3 339 aaPredicted RBP12.4□□□□□ -0.43
NPC1-202ENST00000540608 BHLHA9Q7RTU4 235 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 FAM35AQ86V20 835 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 CARM1Q86X55 608 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 IPMKQ8NFU5 416 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 RIN3Q8TB24 985 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 EDEM1Q92611 657 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 UHRF1Q96T88 793 aaPredicted RBP12.4□□□□□ -0.43
NPC1-202ENST00000540608 FICDQ9BVA6 458 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 GLOD4Q9HC38 313 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 SPAG4Q9NPE6 437 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 TREX1Q9NSU2 369 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 CD300AQ9UGN4 299 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 SLC2A6Q9UGQ3 507 aa12.4□□□□□ -0.43
NPC1-202ENST00000540608 ARHGEF37A1IGU5 675 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms