RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 SERPINB6P35237 376 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 ARHGAP25P42331 645 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 CLDN2P57739 230 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 NXPH1P58417 271 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 SLC14A1Q13336 389 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 RFTN1Q14699 578 aaPredicted RBP15.23■□□□□ 0.03
UBE3B-212ENST00000540230 PAFAH1B3Q15102 231 aaKnown RBP15.23■□□□□ 0.03
UBE3B-212ENST00000540230 PDK2Q15119 407 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 SHBQ15464 509 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 RAD9BQ6WBX8 426 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 GCNT7Q6ZNI0 430 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 SRLQ86TD4 932 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 TTC7BQ86TV6 843 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 NAXDQ8IW45 347 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 CCDC170Q8IYT3 715 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 ATPAF2Q8N5M1 289 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 MFSD2AQ8NA29 543 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 PSKH2Q96QS6 385 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 SUV39H2Q9H5I1 410 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 LCMT1Q9UIC8 334 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 SALL4Q9UJQ4 1053 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 BTBD3Q9Y2F9 522 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 REXO2Q9Y3B8 237 aaKnown RBP15.23■□□□□ 0.03
UBE3B-212ENST00000540230 PCDHA13Q9Y5I0 950 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 SPAARA0A1B0GVQ0 90 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 TSPAN11A1L157 253 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 IGLON5A6NGN9 336 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 C3orf70A6NLC5 250 aaPredicted RBP15.22■□□□□ 0.03
UBE3B-212ENST00000540230 ZNF883P0CG24 379 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 HNRNPA2B1P22626 353 aaKnown RBP15.22■□□□□ 0.03
UBE3B-212ENST00000540230 NUDT1P36639 197 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 CSNK1DP48730 415 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 MAXP61244 160 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 RPS21P63220 83 aaKnown RBP15.22■□□□□ 0.03
UBE3B-212ENST00000540230 FOXK2Q01167 660 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 SEMG2Q02383 582 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 GBE1Q04446 702 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 SLC10A2Q12908 348 aaPredicted RBP15.22■□□□□ 0.03
UBE3B-212ENST00000540230 STAT4Q14765 748 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 ZFYVE27Q5T4F4 411 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 KIAA1161Q6NSJ0 714 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 RAB7BQ96AH8 199 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 FEM1CQ96JP0 617 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 ZNF599Q96NL3 588 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 ELF4Q99607 663 aaPredicted RBP15.22■□□□□ 0.03
UBE3B-212ENST00000540230 SLC17A9Q9BYT1 436 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 DKK3Q9UBP4 350 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 SEPT3Q9UH03 358 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 ASPMQ8IZT6 3477 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 A0A1B0GTQ1 180 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 LRRD1A4D1F6 860 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 NEMP1O14524 444 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 TSPAN6O43657 245 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 CBFA2T3O75081 653 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 NDUFA10O95299 355 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 TNNT1P13805 278 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 CR2P20023 1033 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 COMTP21964 271 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 CYLC1P35663 651 aaPredicted RBP15.22■□□□□ 0.03
UBE3B-212ENST00000540230 GARSP41250 739 aaKnown RBP15.22■□□□□ 0.03
UBE3B-212ENST00000540230 CCT8P50990 548 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 SCNN1BP51168 640 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 GALNT2Q10471 571 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 ZNF235Q14590 738 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 FAM182AQ5T1J6 154 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 DBX2Q6ZNG2 339 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 TMEM139Q8IV31 216 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 SPC24Q8NBT2 197 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 OR13H1Q8NG92 308 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 BMFQ96LC9 184 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 RNF157Q96PX1 679 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 KLF6Q99612 283 aaPredicted RBP15.22■□□□□ 0.03
UBE3B-212ENST00000540230 GDF3Q9NR23 364 aa15.22■□□□□ 0.03
UBE3B-212ENST00000540230 EPN1Q9Y6I3 576 aaPredicted RBP15.22■□□□□ 0.03
UBE3B-212ENST00000540230 WDFY3Q8IZQ1 3526 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 POM121BA6NF01 834 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 TRAFD1O14545 582 aaPredicted RBP15.21■□□□□ 0.03
UBE3B-212ENST00000540230 MMP20O60882 483 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 KRT1P04264 644 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 THEGLP0DJG4 465 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 AKT2P31751 481 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 NOP2P46087 812 aaKnown RBP15.21■□□□□ 0.03
UBE3B-212ENST00000540230 HADHBP55084 474 aaKnown RBP15.21■□□□□ 0.03
UBE3B-212ENST00000540230 NSUN2Q08J23 767 aaKnown RBP eCLIP15.21■□□□□ 0.03
UBE3B-212ENST00000540230 UGP2Q16851 508 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 SLC45A4Q5BKX6 768 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 IQCHQ86VS3 1027 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 GATAD2AQ86YP4 633 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 MAP7D3Q8IWC1 876 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 SLC22A18ASQ8N1D0 253 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 PLD5Q8N7P1 536 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 ACRBPQ8NEB7 543 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 ECHDC3Q96DC8 303 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 TUBGCP5Q96RT8 1024 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 MGME1Q9BQP7 344 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 WRAP53Q9BUR4 548 aaKnown RBP15.21■□□□□ 0.03
UBE3B-212ENST00000540230 C1QTNF2Q9BXJ5 285 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 SLC32A1Q9H598 525 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 PCDH12Q9NPG4 1184 aa15.21■□□□□ 0.03
UBE3B-212ENST00000540230 DTLQ9NZJ0 730 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms