RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 TBC1D3EA0A087X179 549 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 TBC1D3KA0A087X1G2 549 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.31■■□□□ 1.16
TRIM65-202ENST00000540128 TBC1D3FA6NER0 549 aaPredicted RBP22.31■■□□□ 1.16
TRIM65-202ENST00000540128 TBC1D3LB9A6J9 549 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 TRAFD1O14545 582 aaPredicted RBP22.31■■□□□ 1.16
TRIM65-202ENST00000540128 ZSCAN12O43309 604 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 GJB3O75712 270 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 TJP3O95049 919 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 TBC1D3HP0C7X1 549 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 TIMP2P16035 220 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 XRCC4Q13426 336 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 RPS6KA1Q15418 735 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 CSRP2Q16527 193 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 TBC1D3GQ6DHY5 549 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 TBC1D3CQ6IPX1 549 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 AADACL2Q6P093 401 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 BRAT1Q6PJG6 821 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 TRIM69Q86WT6 500 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 CAMK1DQ8IU85 385 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 TBC1D3Q8IZP1 549 aaPredicted RBP22.31■■□□□ 1.16
TRIM65-202ENST00000540128 NOD2Q9HC29 1040 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 NT5MQ9NPB1 228 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 PARD6AQ9NPB6 346 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 HAUS2Q9NVX0 235 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 FADS3Q9Y5Q0 445 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 PI4KAP42356 2102 aa22.31■■□□□ 1.16
TRIM65-202ENST00000540128 TNRC6BQ9UPQ9 1833 aaKnown RBP22.31■■□□□ 1.16
TRIM65-202ENST00000540128 FAM47DPA6NHR8 397 aa22.3■■□□□ 1.16
TRIM65-202ENST00000540128 MEI4A8MW99 385 aa22.3■■□□□ 1.16
TRIM65-202ENST00000540128 HACD1B0YJ81 288 aa22.3■■□□□ 1.16
TRIM65-202ENST00000540128 KCNK1O00180 336 aa22.3■■□□□ 1.16
TRIM65-202ENST00000540128 AREL1O15033 823 aa22.3■■□□□ 1.16
TRIM65-202ENST00000540128 HTRA2O43464 458 aaPredicted RBP22.3■■□□□ 1.16
TRIM65-202ENST00000540128 PIGNO95427 931 aa22.3■■□□□ 1.16
TRIM65-202ENST00000540128 JCHAINP01591 159 aa22.3■■□□□ 1.16
TRIM65-202ENST00000540128 CD27P26842 260 aa22.3■■□□□ 1.16
TRIM65-202ENST00000540128 SERPINA4P29622 427 aa22.3■■□□□ 1.16
TRIM65-202ENST00000540128 HOXD11P31277 338 aaPredicted RBP22.3■■□□□ 1.16
TRIM65-202ENST00000540128 MAXP61244 160 aa22.3■■□□□ 1.16
TRIM65-202ENST00000540128 BCL2L1Q07817 233 aa22.3■■□□□ 1.16
TRIM65-202ENST00000540128 SPEM2Q0P670 501 aa22.3■■□□□ 1.16
TRIM65-202ENST00000540128 AP1B1Q10567 949 aa22.3■■□□□ 1.16
TRIM65-202ENST00000540128 ZNF211Q13398 564 aaPredicted RBP22.3■■□□□ 1.16
TRIM65-202ENST00000540128 RABEPKQ7Z6M1 372 aa22.3■■□□□ 1.16
TRIM65-202ENST00000540128 CNTD1Q8N815 330 aa22.3■■□□□ 1.16
TRIM65-202ENST00000540128 TFB1MQ8WVM0 346 aaKnown RBP22.3■■□□□ 1.16
TRIM65-202ENST00000540128 POLR1EQ9GZS1 481 aaKnown RBP22.3■■□□□ 1.16
TRIM65-202ENST00000540128 SCUBE2Q9NQ36 999 aa22.3■■□□□ 1.16
TRIM65-202ENST00000540128 SEMA4GQ9NTN9 838 aa22.3■■□□□ 1.16
TRIM65-202ENST00000540128 ZNF292O60281 2723 aa22.3■■□□□ 1.16
TRIM65-202ENST00000540128 TTC24A2A3L6 582 aaPredicted RBP22.29■■□□□ 1.16
TRIM65-202ENST00000540128 MTSS1O43312 755 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 FOXD2O60548 495 aaPredicted RBP22.29■■□□□ 1.16
TRIM65-202ENST00000540128 SOCS5O75159 536 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 FSBPO95073 299 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 MAOBP27338 520 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 NUDT1P36639 197 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 ABL2P42684 1182 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 ZBTB17Q13105 803 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 NOMO1Q15155 1222 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 TTC7BQ86TV6 843 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 CEP76Q8TAP6 659 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 ARRDC2Q8TBH0 407 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 ACTL9Q8TC94 416 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 SEMA3CQ99985 751 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 HINFPQ9BQA5 517 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 TLR10Q9BXR5 811 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 SUSD2Q9UGT4 822 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 EIF2B4Q9UI10 523 aaKnown RBP22.29■■□□□ 1.16
TRIM65-202ENST00000540128 RALGAPA1Q6GYQ0 2036 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 MYO15AQ9UKN7 3530 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 CACNA1EQ15878 2313 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 KNL1Q8NG31 2342 aa22.29■■□□□ 1.16
TRIM65-202ENST00000540128 A0A1W2PPC4 97 aa22.28■■□□□ 1.16
TRIM65-202ENST00000540128 A0A1W2PQ67 120 aa22.28■■□□□ 1.16
TRIM65-202ENST00000540128 SPINT1O43278 529 aa22.28■■□□□ 1.16
TRIM65-202ENST00000540128 TSPAN6O43657 245 aa22.28■■□□□ 1.16
TRIM65-202ENST00000540128 HLA-DQB2P05538 268 aa22.28■■□□□ 1.16
TRIM65-202ENST00000540128 PPP2CBP62714 309 aa22.28■■□□□ 1.16
TRIM65-202ENST00000540128 PPP2CAP67775 309 aa22.28■■□□□ 1.16
TRIM65-202ENST00000540128 KLF1Q13351 362 aaPredicted RBP22.28■■□□□ 1.16
TRIM65-202ENST00000540128 UGP2Q16851 508 aa22.28■■□□□ 1.16
TRIM65-202ENST00000540128 DUOXA1Q1HG43 343 aa22.28■■□□□ 1.16
TRIM65-202ENST00000540128 TEX44Q53QW1 395 aa22.28■■□□□ 1.16
TRIM65-202ENST00000540128 SLC23A3Q6PIS1 610 aa22.28■■□□□ 1.16
TRIM65-202ENST00000540128 ZSCAN30Q86W11 494 aa22.28■■□□□ 1.16
TRIM65-202ENST00000540128 HORMAD1Q86X24 394 aa22.28■■□□□ 1.16
TRIM65-202ENST00000540128 ZSWIM9Q86XI8 627 aa22.28■■□□□ 1.16
TRIM65-202ENST00000540128 RGL4Q8IZJ4 473 aa22.28■■□□□ 1.16
TRIM65-202ENST00000540128 QKIQ96PU8 341 aaKnown RBP eCLIP22.28■■□□□ 1.16
TRIM65-202ENST00000540128 CARD9Q9H257 536 aa22.28■■□□□ 1.16
TRIM65-202ENST00000540128 EBF2Q9HAK2 575 aa22.28■■□□□ 1.16
TRIM65-202ENST00000540128 DMDP11532 3685 aa22.27■■□□□ 1.16
TRIM65-202ENST00000540128 WDR87Q6ZQQ6 2873 aa22.27■■□□□ 1.16
TRIM65-202ENST00000540128 RNGTTO60942 597 aaKnown RBP22.27■■□□□ 1.16
TRIM65-202ENST00000540128 GNSP15586 552 aa22.27■■□□□ 1.16
TRIM65-202ENST00000540128 NIPAL4Q0D2K0 466 aa22.27■■□□□ 1.16
TRIM65-202ENST00000540128 IHHQ14623 411 aa22.27■■□□□ 1.16
TRIM65-202ENST00000540128 TMEM259Q4ZIN3 620 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms