RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 RGRP47804 291 aa16.98■□□□□ 0.31
DDB1-215ENST00000539712 ACADVLP49748 655 aa16.98■□□□□ 0.31
DDB1-215ENST00000539712 FZD2Q14332 565 aa16.98■□□□□ 0.31
DDB1-215ENST00000539712 PROX2Q3B8N5 592 aa16.98■□□□□ 0.31
DDB1-215ENST00000539712 TXNRD3NBQ6F5E7 133 aa16.98■□□□□ 0.31
DDB1-215ENST00000539712 KYAT3Q6YP21 454 aaKnown RBP16.98■□□□□ 0.31
DDB1-215ENST00000539712 ARHGAP36Q6ZRI8 547 aa16.98■□□□□ 0.31
DDB1-215ENST00000539712 TTC7BQ86TV6 843 aa16.98■□□□□ 0.31
DDB1-215ENST00000539712 CPLX3Q8WVH0 158 aa16.98■□□□□ 0.31
DDB1-215ENST00000539712 CENPTQ96BT3 561 aa16.98■□□□□ 0.31
DDB1-215ENST00000539712 TRIM11Q96F44 468 aa16.98■□□□□ 0.31
DDB1-215ENST00000539712 NSMCE3Q96MG7 304 aa16.98■□□□□ 0.31
DDB1-215ENST00000539712 CALN1Q9BXU9 219 aa16.98■□□□□ 0.31
DDB1-215ENST00000539712 THAP2Q9H0W7 228 aa16.98■□□□□ 0.31
DDB1-215ENST00000539712 MRPL47Q9HD33 250 aaKnown RBP16.98■□□□□ 0.31
DDB1-215ENST00000539712 IFNKQ9P0W0 207 aa16.98■□□□□ 0.31
DDB1-215ENST00000539712 UBA2Q9UBT2 640 aaPredicted RBP16.98■□□□□ 0.31
DDB1-215ENST00000539712 ACACAQ13085 2346 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 TSPAN11A1L157 253 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 FAM149AA5PLN7 773 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 A6NNZ2 444 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 PIGNO95427 931 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 SERPING1P05155 500 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 DESP17661 470 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 CLDN6P56747 220 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 PFN3P60673 137 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 ACAP1Q15027 740 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 DPYSL2Q16555 572 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 CCDC157Q569K6 752 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 ZNF542PQ5EBM4 170 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 PPP6R3Q5H9R7 873 aaPredicted RBP16.97■□□□□ 0.31
DDB1-215ENST00000539712 ZSCAN30Q86W11 494 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 ZSWIM9Q86XI8 627 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 FAM174AQ8TBP5 190 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 IFT43Q96FT9 208 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 DONSONQ9NYP3 566 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 KLF15Q9UIH9 416 aa16.97■□□□□ 0.31
DDB1-215ENST00000539712 TDRD6O60522 2096 aaKnown RBP16.97■□□□□ 0.31
DDB1-215ENST00000539712 SPTY2D1-AS1A0A0U1RR47 76 aa16.96■□□□□ 0.31
DDB1-215ENST00000539712 MUSKO15146 869 aa16.96■□□□□ 0.31
DDB1-215ENST00000539712 SIGLEC6O43699 453 aa16.96■□□□□ 0.31
DDB1-215ENST00000539712 MMP20O60882 483 aa16.96■□□□□ 0.31
DDB1-215ENST00000539712 PIAS2O75928 621 aa16.96■□□□□ 0.31
DDB1-215ENST00000539712 CYP1A2P05177 515 aa16.96■□□□□ 0.31
DDB1-215ENST00000539712 C1SP09871 688 aa16.96■□□□□ 0.31
DDB1-215ENST00000539712 TPM4P67936 248 aa16.96■□□□□ 0.31
DDB1-215ENST00000539712 SGCGQ13326 291 aa16.96■□□□□ 0.31
DDB1-215ENST00000539712 ZNF211Q13398 564 aaPredicted RBP16.96■□□□□ 0.31
DDB1-215ENST00000539712 TDRD12Q587J7 1177 aaKnown RBP16.96■□□□□ 0.31
DDB1-215ENST00000539712 POLNQ7Z5Q5 900 aa16.96■□□□□ 0.31
DDB1-215ENST00000539712 PTAR1Q7Z6K3 402 aaPredicted RBP16.96■□□□□ 0.31
DDB1-215ENST00000539712 DCP2Q8IU60 420 aaKnown RBP16.96■□□□□ 0.31
DDB1-215ENST00000539712 NIPA2Q8N8Q9 360 aa16.96■□□□□ 0.31
DDB1-215ENST00000539712 TSEN2Q8NCE0 465 aaKnown RBP16.96■□□□□ 0.31
DDB1-215ENST00000539712 HCAR2Q8TDS4 363 aa16.96■□□□□ 0.31
DDB1-215ENST00000539712 ARHGEF26Q96DR7 871 aa16.96■□□□□ 0.31
DDB1-215ENST00000539712 BTBD6Q96KE9 485 aa16.96■□□□□ 0.31
DDB1-215ENST00000539712 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.96■□□□□ 0.31
DDB1-215ENST00000539712 ETNK2Q9NVF9 386 aa16.96■□□□□ 0.31
DDB1-215ENST00000539712 PNMA8BQ9ULN7 279 aaPredicted RBP16.96■□□□□ 0.31
DDB1-215ENST00000539712 LUC7L2Q9Y383 392 aaKnown RBP16.96■□□□□ 0.31
DDB1-215ENST00000539712 ARHGAP42A6NI28 874 aa16.95■□□□□ 0.3
DDB1-215ENST00000539712 GOLGA6L19H0YKK7 550 aa16.95■□□□□ 0.3
DDB1-215ENST00000539712 NEMP1O14524 444 aa16.95■□□□□ 0.3
DDB1-215ENST00000539712 PEX11BO96011 259 aa16.95■□□□□ 0.3
DDB1-215ENST00000539712 RARAP10276 462 aa16.95■□□□□ 0.3
DDB1-215ENST00000539712 CKMT2P17540 419 aa16.95■□□□□ 0.3
DDB1-215ENST00000539712 HNRNPH3P31942 346 aaKnown RBP16.95■□□□□ 0.3
DDB1-215ENST00000539712 CSNK1DP48730 415 aa16.95■□□□□ 0.3
DDB1-215ENST00000539712 ZNF135P52742 658 aaPredicted RBP16.95■□□□□ 0.3
DDB1-215ENST00000539712 SLC25A11Q02978 314 aaKnown RBP16.95■□□□□ 0.3
DDB1-215ENST00000539712 RAD51Q06609 339 aa16.95■□□□□ 0.3
DDB1-215ENST00000539712 SMTNL2Q2TAL5 461 aa16.95■□□□□ 0.3
DDB1-215ENST00000539712 TMEM52BQ4KMG9 183 aa16.95■□□□□ 0.3
DDB1-215ENST00000539712 BOLA3Q53S33 107 aa16.95■□□□□ 0.3
DDB1-215ENST00000539712 PROSER1Q86XN7 944 aa16.95■□□□□ 0.3
DDB1-215ENST00000539712 CAMK1DQ8IU85 385 aa16.95■□□□□ 0.3
DDB1-215ENST00000539712 GALNT15Q8N3T1 639 aa16.95■□□□□ 0.3
DDB1-215ENST00000539712 DENND6BQ8NEG7 585 aa16.95■□□□□ 0.3
DDB1-215ENST00000539712 OR4C6Q8NH72 309 aa16.95■□□□□ 0.3
DDB1-215ENST00000539712 NCAPGQ9BPX3 1015 aa16.95■□□□□ 0.3
DDB1-215ENST00000539712 XPO4Q9C0E2 1151 aaKnown RBP16.95■□□□□ 0.3
DDB1-215ENST00000539712 SUV39H2Q9H5I1 410 aa16.95■□□□□ 0.3
DDB1-215ENST00000539712 MBNL1Q9NR56 388 aaKnown RBP16.95■□□□□ 0.3
DDB1-215ENST00000539712 LOC400499M0QZD8 3231 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 FAM208BQ5VWN6 2430 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 LY6G6EA0A0G2JKS1 128 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 FPGTO14772 594 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 DAPK3O43293 454 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 RFPL3O75679 317 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 CSF2P04141 144 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 NME1P15531 152 aaKnown RBP16.94■□□□□ 0.3
DDB1-215ENST00000539712 AMPD1P23109 780 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 IL4RP24394 825 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 ACP1P24666 158 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 CASP14P31944 242 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 IGFALSP35858 605 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 RABIFP47224 123 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 IL10RBQ08334 325 aa16.94■□□□□ 0.3
DDB1-215ENST00000539712 EIF2B5Q13144 721 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms