RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 VPS37AQ8NEZ2 397 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 KCTD13Q8WZ19 329 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 ALKBH8Q96BT7 664 aaKnown RBP8.32□□□□□ -1.08
ABCA4-207ENST00000536513 PGM2Q96G03 612 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 TUBB6Q9BUF5 446 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 CINPQ9BW66 212 aaPredicted RBP8.32□□□□□ -1.08
ABCA4-207ENST00000536513 VN1R3Q9BXE9 311 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 UBE2OQ9C0C9 1292 aaKnown RBP8.32□□□□□ -1.08
ABCA4-207ENST00000536513 MTIF3Q9H2K0 278 aaKnown RBP8.32□□□□□ -1.08
ABCA4-207ENST00000536513 SAGE1Q9NXZ1 904 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 LSM7Q9UK45 103 aaKnown RBP8.32□□□□□ -1.08
ABCA4-207ENST00000536513 INSL6Q9Y581 213 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 KCTD3Q9Y597 815 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 WNT6Q9Y6F9 365 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 PDE5AO76074 875 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 ASPHQ12797 758 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 C1QTNF12Q5T7M4 302 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 LVRNQ6Q4G3 990 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 EXOC3L1Q86VI1 746 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 CCNYL1Q8N7R7 359 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 PTPRN2Q92932 1015 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 TSNARE1Q96NA8 513 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 PREBQ9HCU5 417 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.32□□□□□ -1.08
ABCA4-207ENST00000536513 AFF4Q9UHB7 1163 aaKnown RBP8.32□□□□□ -1.08
ABCA4-207ENST00000536513 TSC22D4Q9Y3Q8 395 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 INSL5Q9Y5Q6 135 aa8.32□□□□□ -1.08
ABCA4-207ENST00000536513 SDR42E2A6NKP2 422 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 PGM3O95394 542 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 RPA3P35244 121 aaPredicted RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 VIPR2P41587 438 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 MMP13P45452 471 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 SGSHP51688 502 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 ATXN3P54252 364 aaPredicted RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 CAV1Q03135 178 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 NSUN2Q08J23 767 aaKnown RBP eCLIP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 BNIP1Q12981 228 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 CYP1B1Q16678 543 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 FAM26DQ5JW98 314 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 ARMC12Q5T9G4 340 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 ITPRIPL1Q6GPH6 555 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 STRA8Q7Z7C7 330 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 TNS4Q8IZW8 715 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 RIBC1Q8N443 379 aaPredicted RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 TDRD5Q8NAT2 981 aaKnown RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 DRAXINQ8NBI3 349 aaPredicted RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 GANCQ8TET4 914 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 MAN1C1Q9NR34 630 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 ZNF358Q9NW07 568 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 UTP6Q9NYH9 597 aaKnown RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 CCL26Q9Y258 94 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 NEMP1O14524 444 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 SCAMP1O15126 338 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 HLA-DQB2P05538 268 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 ADRA1DP25100 572 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 MLLT6P55198 1093 aaPredicted RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 GEMIN4P57678 1058 aaKnown RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 RHOAP61586 193 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 FAM189BP81408 668 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 SLC34A1Q06495 639 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 TEAD2Q15562 447 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 C10orf62Q5T681 223 aaPredicted RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 IYDQ6PHW0 289 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 UNC5AQ6ZN44 842 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 SYDE1Q6ZW31 735 aaPredicted RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 CENPTQ96BT3 561 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 BBS2Q9BXC9 721 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 LINC00597Q9H2U6 94 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 CYP4F12Q9HCS2 524 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 ZNF334Q9HCZ1 680 aaPredicted RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 SLC2A6Q9UGQ3 507 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 ITM2BQ9Y287 266 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 DRG1Q9Y295 367 aaKnown RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 PCDHB9Q9Y5E1 797 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 NCF1BA6NI72 391 aaPredicted RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 NCF1CA8MVU1 366 aaPredicted RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 GPR39O43194 453 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 SLC2A3P11169 496 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 NCF1P14598 390 aaPredicted RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 NCF2P19878 526 aaPredicted RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 FGFR3P22607 806 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 MZF1P28698 734 aaPredicted RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 TMED10P49755 219 aaKnown RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 ALDH18A1P54886 795 aaKnown RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 GPX6P59796 221 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 PPIGQ13427 754 aaKnown RBP eCLIP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 TEX44Q53QW1 395 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 ZNF572Q7Z3I7 529 aaPredicted RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 APLFQ8IW19 511 aaPredicted RBP8.31□□□□□ -1.08
ABCA4-207ENST00000536513 DENND6AQ8IWF6 608 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 BBS7Q8IWZ6 715 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 BBS5Q8N3I7 341 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 ATP2A3Q93084 1043 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 NSL1Q96IY1 281 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 BTN2A3PQ96KV6 586 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 ARMCX1Q9P291 453 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 SLC12A4Q9UP95 1085 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 PSAT1Q9Y617 370 aa8.31□□□□□ -1.08
ABCA4-207ENST00000536513 ZNF840PA6NDX5 716 aa8.3□□□□□ -1.08
ABCA4-207ENST00000536513 C5orf60A6NFR6 353 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms