RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 LLGL1Q15334 1064 aa13.71□□□□□ -0.21
RPAIN-205ENST00000536255 ARSIQ5FYB1 569 aa13.71□□□□□ -0.21
RPAIN-205ENST00000536255 ATXN7L2Q5T6C5 722 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-205ENST00000536255 AGBL4Q5VU57 503 aa13.71□□□□□ -0.21
RPAIN-205ENST00000536255 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-205ENST00000536255 DGLUCYQ7Z3D6 616 aa13.71□□□□□ -0.21
RPAIN-205ENST00000536255 REXO1L1PQ8IX06 675 aa13.71□□□□□ -0.21
RPAIN-205ENST00000536255 CCDC13Q8IYE1 715 aa13.71□□□□□ -0.21
RPAIN-205ENST00000536255 OR14C36Q8NHC7 312 aa13.71□□□□□ -0.21
RPAIN-205ENST00000536255 C1orf216Q8TAB5 229 aa13.71□□□□□ -0.21
RPAIN-205ENST00000536255 OLFM3Q96PB7 478 aa13.71□□□□□ -0.21
RPAIN-205ENST00000536255 FERMT1Q9BQL6 677 aa13.71□□□□□ -0.21
RPAIN-205ENST00000536255 HEMGNQ9BXL5 484 aa13.71□□□□□ -0.21
RPAIN-205ENST00000536255 FSCN3Q9NQT6 498 aa13.71□□□□□ -0.21
RPAIN-205ENST00000536255 TRMT1Q9NXH9 659 aaKnown RBP13.71□□□□□ -0.21
RPAIN-205ENST00000536255 LHX3Q9UBR4 397 aa13.71□□□□□ -0.21
RPAIN-205ENST00000536255 AMACRQ9UHK6 382 aa13.71□□□□□ -0.21
RPAIN-205ENST00000536255 GON4LQ3T8J9 2241 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 C4orf47A7E2U8 309 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 C10orf142B7Z368 130 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 ARHGAP33O14559 1287 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 PLRG1O43660 514 aaKnown RBP13.7□□□□□ -0.22
RPAIN-205ENST00000536255 ZNF189O75820 626 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-205ENST00000536255 PEX11BO96011 259 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 SYPP08247 313 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 CCNB1P14635 433 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 CD27P26842 260 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 AFF3P51826 1226 aaKnown RBP13.7□□□□□ -0.22
RPAIN-205ENST00000536255 AP1S1P61966 158 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 AP1B1Q10567 949 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 RALGPS1Q5JS13 557 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 NPNTQ6UXI9 565 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 ERMP1Q7Z2K6 904 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 TTC13Q8NBP0 860 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 TSEN2Q8NCE0 465 aaKnown RBP13.7□□□□□ -0.22
RPAIN-205ENST00000536255 TFB1MQ8WVM0 346 aaKnown RBP13.7□□□□□ -0.22
RPAIN-205ENST00000536255 MAML1Q92585 1016 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 EXOC2Q96KP1 924 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 TUBGCP5Q96RT8 1024 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 GTPBP2Q9BX10 602 aaKnown RBP13.7□□□□□ -0.22
RPAIN-205ENST00000536255 CPEB1Q9BZB8 566 aaKnown RBP13.7□□□□□ -0.22
RPAIN-205ENST00000536255 KDM4CQ9H3R0 1056 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 TPX2Q9ULW0 747 aaKnown RBP13.7□□□□□ -0.22
RPAIN-205ENST00000536255 SLCO1B1Q9Y6L6 691 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 WASF2Q9Y6W5 498 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 NUMA1Q14980 2115 aa13.7□□□□□ -0.22
RPAIN-205ENST00000536255 TBC1D3DA0A087WVF3 549 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 TBC1D3IA0A087WXS9 549 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 TBC1D3EA0A087X179 549 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 TBC1D3KA0A087X1G2 549 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 DCDC2BA2VCK2 349 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 TBC1D3FA6NER0 549 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-205ENST00000536255 HACD1B0YJ81 288 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 TBC1D3LB9A6J9 549 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 RNF103O00237 685 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 TM4SF5O14894 197 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 MTSS1O43312 755 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 TBC1D3HP0C7X1 549 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 CES1P23141 567 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 ITGB7P26010 798 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 SCNN1BP51168 640 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 CCR5P51681 352 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 ATXN3P54252 364 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-205ENST00000536255 ZNF211Q13398 564 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-205ENST00000536255 XRCC4Q13426 336 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 ZNF805Q5CZA5 627 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 CFAP58Q5T655 872 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 PIP5KL1Q5T9C9 394 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 TBC1D3GQ6DHY5 549 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 TBC1D3CQ6IPX1 549 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 SRLQ86TD4 932 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 TBC1D3Q8IZP1 549 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-205ENST00000536255 TEX26Q8N6G2 289 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 OR6K2Q8NGY2 324 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 ARRDC3Q96B67 414 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 HAUS1Q96CS2 278 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 ZNF641Q96N77 438 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-205ENST00000536255 LGMNQ99538 433 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 MGME1Q9BQP7 344 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 ORAI3Q9BRQ5 295 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 HDAC8Q9BY41 377 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 ZDHHC5Q9C0B5 715 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 POLR1EQ9GZS1 481 aaKnown RBP13.69□□□□□ -0.22
RPAIN-205ENST00000536255 CARD9Q9H257 536 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 ATP13A3Q9H7F0 1226 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 TM9SF3Q9HD45 589 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 JRKLQ9Y4A0 524 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 PCDH15Q96QU1 1955 aa13.69□□□□□ -0.22
RPAIN-205ENST00000536255 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.68□□□□□ -0.22
RPAIN-205ENST00000536255 A0A1W2PPC4 97 aa13.68□□□□□ -0.22
RPAIN-205ENST00000536255 KCNK3O14649 394 aa13.68□□□□□ -0.22
RPAIN-205ENST00000536255 UGT2B4P06133 528 aa13.68□□□□□ -0.22
RPAIN-205ENST00000536255 PECAM1P16284 738 aaPredicted RBP13.68□□□□□ -0.22
RPAIN-205ENST00000536255 SERPINA4P29622 427 aa13.68□□□□□ -0.22
RPAIN-205ENST00000536255 NEK3P51956 506 aa13.68□□□□□ -0.22
RPAIN-205ENST00000536255 TAS2R38P59533 333 aa13.68□□□□□ -0.22
RPAIN-205ENST00000536255 PPP2CBP62714 309 aa13.68□□□□□ -0.22
RPAIN-205ENST00000536255 PPP2CAP67775 309 aa13.68□□□□□ -0.22
RPAIN-205ENST00000536255 IFI35P80217 286 aaPredicted RBP13.68□□□□□ -0.22
RPAIN-205ENST00000536255 ADCY2Q08462 1091 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms