RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 TMIEQ8NEW7 156 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 PIGKQ92643 395 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 LRIG1Q96JA1 1093 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 OLFM3Q96PB7 478 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 FAM129BQ96TA1 746 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 CINPQ9BW66 212 aaPredicted RBP12.86□□□□□ -0.35
DDB1-207ENST00000535967 OSBPL8Q9BZF1 889 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 TNKS2Q9H2K2 1166 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 TMEM74BQ9NUR3 256 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 HAUS2Q9NVX0 235 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 LHX3Q9UBR4 397 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 SEPT3Q9UH03 358 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 IL36AQ9UHA7 158 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 AMACRQ9UHK6 382 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 HEY1Q9Y5J3 304 aa12.86□□□□□ -0.35
DDB1-207ENST00000535967 IGSF10Q6WRI0 2623 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 KNL1Q8NG31 2342 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 CELSR3Q9NYQ7 3312 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 APOC4-APOC2K7ER74 178 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 APOC2P02655 101 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 KRT10P13645 584 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 CEACAM1P13688 526 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 CSRP1P21291 193 aaKnown RBP12.85□□□□□ -0.35
DDB1-207ENST00000535967 C5AR1P21730 350 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 CHRNA3P32297 505 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 PTGER3P43115 390 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 PSMD8P48556 350 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 DYNLT1P63172 113 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 GUCA2AQ02747 115 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 RAD51Q06609 339 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 PPIDQ08752 370 aaKnown RBP12.85□□□□□ -0.35
DDB1-207ENST00000535967 SLC10A2Q12908 348 aaPredicted RBP12.85□□□□□ -0.35
DDB1-207ENST00000535967 ZNF235Q14590 738 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 LBRQ14739 615 aaKnown RBP12.85□□□□□ -0.35
DDB1-207ENST00000535967 GRM3Q14832 879 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 RPS6KA1Q15418 735 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 KAZNQ674X7 775 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 LEKR1Q6ZMV7 388 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 DPY19L3Q6ZPD9 716 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 MMAAQ8IVH4 418 aaKnown RBP12.85□□□□□ -0.35
DDB1-207ENST00000535967 NETO2Q8NC67 525 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 MAML1Q92585 1016 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 P3H4Q92791 437 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 PPP1R16AQ96I34 528 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 PSKH2Q96QS6 385 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 HEPHQ9BQS7 1158 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 OSBPL1AQ9BXW6 950 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 TM6SF2Q9BZW4 377 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 SLC6A17Q9H1V8 727 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 CARD9Q9H257 536 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 PABPC3Q9H361 631 aaKnown RBP12.85□□□□□ -0.35
DDB1-207ENST00000535967 FSCN3Q9NQT6 498 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 ITM2CQ9NQX7 267 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 FZD4Q9ULV1 537 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 ACTL7AQ9Y615 435 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.85□□□□□ -0.35
DDB1-207ENST00000535967 LAMA5O15230 3695 aa12.85□□□□□ -0.35
DDB1-207ENST00000535967 ATXN2Q99700 1313 aaKnown RBP12.85□□□□□ -0.35
DDB1-207ENST00000535967 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 SRRM3A6NNA2 597 aaPredicted RBP12.84□□□□□ -0.35
DDB1-207ENST00000535967 MATN3O15232 486 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 HYAL3O43820 417 aaPredicted RBP12.84□□□□□ -0.35
DDB1-207ENST00000535967 BNIP3LO60238 219 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 ZNF189O75820 626 aaPredicted RBP12.84□□□□□ -0.35
DDB1-207ENST00000535967 TJP3O95049 919 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 POP4O95707 220 aaKnown RBP12.84□□□□□ -0.35
DDB1-207ENST00000535967 PEX11BO96011 259 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 PYGMP11217 842 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 OXTRP30559 389 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 MMP13P45452 471 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 MAPK8P45983 427 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 CSNK1DP48730 415 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 DNA2P51530 1060 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 TPMTP51580 245 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 HNRNPDQ14103 355 aaKnown RBP12.84□□□□□ -0.35
DDB1-207ENST00000535967 CYTH1Q15438 398 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 MAP7D1Q3KQU3 841 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 RALGPS1Q5JS13 557 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 DCAF12L1Q5VU92 463 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 SLC36A4Q6YBV0 504 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 CACUL1Q86Y37 369 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 CCDC13Q8IYE1 715 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 TMEFF1Q8IYR6 380 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 TEX26Q8N6G2 289 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 PIP4K2CQ8TBX8 421 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 ERLEC1Q96DZ1 483 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 KCND1Q9NSA2 647 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 HECAQ9UBI9 543 aaPredicted RBP12.84□□□□□ -0.35
DDB1-207ENST00000535967 MBD1Q9UIS9 605 aaPredicted RBP12.84□□□□□ -0.35
DDB1-207ENST00000535967 PPM1HQ9ULR3 514 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 PYCARDQ9ULZ3 195 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 NCKAP1Q9Y2A7 1128 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 WASF2Q9Y6W5 498 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 PLXNA2O75051 1894 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 LOC400499M0QZD8 3231 aa12.84□□□□□ -0.35
DDB1-207ENST00000535967 PCDH15Q96QU1 1955 aa12.83□□□□□ -0.35
DDB1-207ENST00000535967 LRRK1Q38SD2 2015 aa12.83□□□□□ -0.36
DDB1-207ENST00000535967 IGHV1OR15-9A0A0B4J2B8 117 aa12.83□□□□□ -0.36
DDB1-207ENST00000535967 SPAARA0A1B0GVQ0 90 aa12.83□□□□□ -0.36
DDB1-207ENST00000535967 HACD1B0YJ81 288 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms