RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 LRFN5Q96NI6 719 aa4.64□□□□□ -1.67
VBP1-203ENST00000535916 RMDN3Q96TC7 470 aa4.64□□□□□ -1.67
VBP1-203ENST00000535916 CSF3RQ99062 836 aa4.64□□□□□ -1.67
VBP1-203ENST00000535916 WDR12Q9GZL7 423 aaKnown RBP4.64□□□□□ -1.67
VBP1-203ENST00000535916 DACT1Q9NYF0 836 aa4.64□□□□□ -1.67
VBP1-203ENST00000535916 GAB2Q9UQC2 676 aa4.64□□□□□ -1.67
VBP1-203ENST00000535916 LRCH1Q9Y2L9 728 aa4.64□□□□□ -1.67
VBP1-203ENST00000535916 PPM1GO15355 546 aaPredicted RBP4.63□□□□□ -1.67
VBP1-203ENST00000535916 HBP1O60381 514 aa4.63□□□□□ -1.67
VBP1-203ENST00000535916 SERPINC1P01008 464 aa4.63□□□□□ -1.67
VBP1-203ENST00000535916 GM2AP17900 193 aa4.63□□□□□ -1.67
VBP1-203ENST00000535916 CENPAP49450 140 aa4.63□□□□□ -1.67
VBP1-203ENST00000535916 PHEXP78562 749 aa4.63□□□□□ -1.67
VBP1-203ENST00000535916 SH2D4BQ5SQS7 431 aa4.63□□□□□ -1.67
VBP1-203ENST00000535916 TRMT1LQ7Z2T5 733 aaKnown RBP4.63□□□□□ -1.67
VBP1-203ENST00000535916 KLHDC8BQ8IXV7 354 aa4.63□□□□□ -1.67
VBP1-203ENST00000535916 TAF15Q92804 592 aaKnown RBP eCLIP4.63□□□□□ -1.67
VBP1-203ENST00000535916 LRRC4Q9HBW1 653 aa4.63□□□□□ -1.67
VBP1-203ENST00000535916 SCRT2Q9NQ03 307 aa4.63□□□□□ -1.67
VBP1-203ENST00000535916 GEMIN8Q9NWZ8 242 aaKnown RBP4.63□□□□□ -1.67
VBP1-203ENST00000535916 SMARCAL1Q9NZC9 954 aa4.63□□□□□ -1.67
VBP1-203ENST00000535916 SLC9A2Q9UBY0 812 aa4.63□□□□□ -1.67
VBP1-203ENST00000535916 SNX9Q9Y5X1 595 aa4.63□□□□□ -1.67
VBP1-203ENST00000535916 HMX3A6NHT5 357 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 P2RY10O00398 339 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 SEPT4O43236 478 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 HSPA12AO43301 675 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 GAGE7O76087 117 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 ADAP00813 363 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 LINC00271P0C7V0 271 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 GAGE12FP0CL80 117 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 GAGE12GP0CL81 117 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 GAGE12IP0CL82 117 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 KCNA5P22460 613 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 TTKP33981 857 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 RBM5P52756 815 aaKnown RBP eCLIP4.62□□□□□ -1.67
VBP1-203ENST00000535916 PRKAA2P54646 552 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 ARSFP54793 590 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 GAGE1Q13065 139 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 GAGE4Q13068 117 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 ZNF484Q5JVG2 852 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 GJB7Q6PEY0 223 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 GHDCQ8N2G8 530 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 LINS1Q8NG48 757 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 CSGALNACT1Q8TDX6 532 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 GOLGA1Q92805 767 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 CCDC136Q96JN2 1154 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 TAF1DQ9H5J8 278 aaPredicted RBP4.62□□□□□ -1.67
VBP1-203ENST00000535916 NOX4Q9NPH5 578 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 G6PC2Q9NQR9 355 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 ANKRD10Q9NXR5 420 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 ZNF224Q9NZL3 707 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 SLCO3A1Q9UIG8 710 aa4.62□□□□□ -1.67
VBP1-203ENST00000535916 FAM172BPA6NC97 362 aa4.61□□□□□ -1.67
VBP1-203ENST00000535916 LDLRP01130 860 aa4.61□□□□□ -1.67
VBP1-203ENST00000535916 TFPIP10646 304 aa4.61□□□□□ -1.67
VBP1-203ENST00000535916 SERPINB3P29508 390 aa4.61□□□□□ -1.67
VBP1-203ENST00000535916 PIGAP37287 484 aa4.61□□□□□ -1.67
VBP1-203ENST00000535916 TANGO2Q6ICL3 276 aa4.61□□□□□ -1.67
VBP1-203ENST00000535916 SHFQ7M4L6 423 aa4.61□□□□□ -1.67
VBP1-203ENST00000535916 SFTPA2Q8IWL1 248 aa4.61□□□□□ -1.67
VBP1-203ENST00000535916 CIARTQ8N365 385 aaPredicted RBP4.61□□□□□ -1.67
VBP1-203ENST00000535916 ZMIZ2Q8NF64 920 aa4.61□□□□□ -1.67
VBP1-203ENST00000535916 USP13Q92995 863 aaPredicted RBP4.61□□□□□ -1.67
VBP1-203ENST00000535916 MMTAG2Q9BU76 263 aaKnown RBP4.61□□□□□ -1.67
VBP1-203ENST00000535916 C1QTNF5Q9BXJ0 243 aa4.61□□□□□ -1.67
VBP1-203ENST00000535916 SPATS2LQ9NUQ6 558 aaKnown RBP4.61□□□□□ -1.67
VBP1-203ENST00000535916 SLC22A3O75751 556 aa4.6□□□□□ -1.67
VBP1-203ENST00000535916 LIFRP42702 1097 aa4.6□□□□□ -1.67
VBP1-203ENST00000535916 CLCN3P51790 818 aa4.6□□□□□ -1.67
VBP1-203ENST00000535916 ICA1Q05084 483 aa4.6□□□□□ -1.67
VBP1-203ENST00000535916 ZNF155Q12901 538 aaPredicted RBP4.6□□□□□ -1.67
VBP1-203ENST00000535916 CHAF1AQ13111 956 aaPredicted RBP4.6□□□□□ -1.67
VBP1-203ENST00000535916 TNFAIP1Q13829 316 aa4.6□□□□□ -1.67
VBP1-203ENST00000535916 NAPEPLDQ6IQ20 393 aa4.6□□□□□ -1.67
VBP1-203ENST00000535916 OR6Y1Q8NGX8 325 aa4.6□□□□□ -1.67
VBP1-203ENST00000535916 C3orf30Q96M34 536 aa4.6□□□□□ -1.67
VBP1-203ENST00000535916 CRB3Q9BUF7 120 aa4.6□□□□□ -1.67
VBP1-203ENST00000535916 KRTAP4-3Q9BYR4 195 aa4.6□□□□□ -1.67
VBP1-203ENST00000535916 PTPRHQ9HD43 1115 aa4.6□□□□□ -1.67
VBP1-203ENST00000535916 ZFP57Q9NU63 452 aa4.6□□□□□ -1.67
VBP1-203ENST00000535916 SIX4Q9UIU6 781 aa4.6□□□□□ -1.67
VBP1-203ENST00000535916 ZNF711Q9Y462 761 aa4.6□□□□□ -1.67
VBP1-203ENST00000535916 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
VBP1-203ENST00000535916 APOHP02749 345 aaPredicted RBP4.59□□□□□ -1.67
VBP1-203ENST00000535916 FUT6P51993 359 aa4.59□□□□□ -1.67
VBP1-203ENST00000535916 CCDC6Q16204 474 aa4.59□□□□□ -1.67
VBP1-203ENST00000535916 SATL1Q86VE3 508 aa4.59□□□□□ -1.67
VBP1-203ENST00000535916 ZC3HC1Q86WB0 502 aaKnown RBP4.59□□□□□ -1.67
VBP1-203ENST00000535916 SFR1Q86XK3 245 aa4.59□□□□□ -1.67
VBP1-203ENST00000535916 DNAAF1Q8NEP3 725 aa4.59□□□□□ -1.67
VBP1-203ENST00000535916 CREB3L4Q8TEY5 395 aa4.59□□□□□ -1.67
VBP1-203ENST00000535916 FIG4Q92562 907 aa4.59□□□□□ -1.67
VBP1-203ENST00000535916 TANKQ92844 425 aa4.59□□□□□ -1.67
VBP1-203ENST00000535916 FBXO17Q96EF6 278 aa4.59□□□□□ -1.67
VBP1-203ENST00000535916 RNFT2Q96EX2 444 aa4.59□□□□□ -1.67
VBP1-203ENST00000535916 MASTLQ96GX5 879 aa4.59□□□□□ -1.67
VBP1-203ENST00000535916 NPLQ9BXD5 320 aaPredicted RBP4.59□□□□□ -1.67
VBP1-203ENST00000535916 CNPY2Q9Y2B0 182 aa4.59□□□□□ -1.67
VBP1-203ENST00000535916 SNED1Q8TER0 1413 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms