RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 SLC12A1Q13621 1099 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 KIAA0930Q6ICG6 404 aaPredicted RBP13.51□□□□□ -0.25
VPS33B-202ENST00000535906 NPAS4Q8IUM7 802 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 SPATA6LQ8N4H0 392 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 TEX26Q8N6G2 289 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 C2CD4AQ8NCU7 369 aaPredicted RBP13.51□□□□□ -0.25
VPS33B-202ENST00000535906 SCG3Q8WXD2 468 aaKnown RBP13.51□□□□□ -0.25
VPS33B-202ENST00000535906 SCLYQ96I15 445 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 PANX3Q96QZ0 392 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 TTPALQ9BTX7 342 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 GATA5Q9BWX5 397 aaPredicted RBP13.51□□□□□ -0.25
VPS33B-202ENST00000535906 RAMP2O60895 175 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 HSPA4LO95757 839 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 GNRH1P01148 92 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 PAMP19021 973 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 CPOXP36551 454 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 SERPINH1P50454 418 aaKnown RBP13.5□□□□□ -0.25
VPS33B-202ENST00000535906 RAB10P61026 200 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 RING1Q06587 406 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 SERINC3Q13530 473 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 NEPROQ6NW34 567 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 RIPOR1Q6ZS17 1223 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 ANKS3Q6ZW76 656 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 FSTL5Q8N475 847 aaPredicted RBP13.5□□□□□ -0.25
VPS33B-202ENST00000535906 PNPLA1Q8N8W4 532 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 ARRDC2Q8TBH0 407 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 MICAL1Q8TDZ2 1067 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 CLPTM1LQ96KA5 538 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 OSBPL1AQ9BXW6 950 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 PRKD2Q9BZL6 878 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 UBE2OQ9C0C9 1292 aaKnown RBP13.5□□□□□ -0.25
VPS33B-202ENST00000535906 VPS45Q9NRW7 570 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 SLC7A8Q9UHI5 535 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 FBXO5Q9UKT4 447 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 SUFUQ9UMX1 484 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 MKI67P46013 3256 aaKnown RBP13.5□□□□□ -0.25
VPS33B-202ENST00000535906 HEATR9A2RTY3 570 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 SLC38A8A6NNN8 435 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 STMN1P16949 149 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 ELAVL2Q12926 359 aaKnown RBP13.5□□□□□ -0.25
VPS33B-202ENST00000535906 DLG1Q12959 904 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 ZRSR2Q15696 482 aaKnown RBP13.5□□□□□ -0.25
VPS33B-202ENST00000535906 ZNF789Q5FWF6 425 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 CNSTQ6PJW8 725 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 SPNS2Q8IVW8 549 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 CFAP52Q8N1V2 620 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 FBXO22Q8NEZ5 403 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 AGR3Q8TD06 166 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 NXNL1Q96CM4 212 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 LBHD1Q9BQE6 289 aaPredicted RBP13.5□□□□□ -0.25
VPS33B-202ENST00000535906 UNKQ9C0B0 810 aaKnown RBP13.5□□□□□ -0.25
VPS33B-202ENST00000535906 COG4Q9H9E3 785 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 ACOT9Q9Y305 439 aa13.5□□□□□ -0.25
VPS33B-202ENST00000535906 A6NHS1 94 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 TMEM114B3SHH9 223 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 TARM1B6A8C7 271 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 H7C4K7 107 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 PITPNM1O00562 1244 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 MYCP01106 439 aaPredicted RBP13.49□□□□□ -0.25
VPS33B-202ENST00000535906 CHRNGP07510 517 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 RPL17P18621 184 aaKnown RBP13.49□□□□□ -0.25
VPS33B-202ENST00000535906 CCR10P46092 362 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 TAS2R39P59534 338 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 MRPS35P82673 323 aaKnown RBP13.49□□□□□ -0.25
VPS33B-202ENST00000535906 IL10RBQ08334 325 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 SMARCB1Q12824 385 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 TSTD2Q5T7W7 516 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 ZYG11AQ6WRX3 759 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 MYLK4Q86YV6 388 aaPredicted RBP13.49□□□□□ -0.25
VPS33B-202ENST00000535906 PPFIBP2Q8ND30 876 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 OR13J1Q8NGT2 312 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 STYXQ8WUJ0 223 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 TADA1Q96BN2 335 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 FAM136AQ96C01 138 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 ELMO2Q96JJ3 720 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 SCYL1Q96KG9 808 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 GPR78Q96P69 363 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 CDH19Q9H159 772 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 UXTQ9UBK9 157 aaPredicted RBP13.49□□□□□ -0.25
VPS33B-202ENST00000535906 ANGPTL2Q9UKU9 493 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 LRCH1Q9Y2L9 728 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 MUSKO15146 869 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 PQBP1O60828 265 aaKnown RBP13.49□□□□□ -0.25
VPS33B-202ENST00000535906 APOA4P06727 396 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 TACR2P21452 398 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 CD151P48509 253 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 KLC1Q07866 573 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 TNK2Q07912 1038 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 PARP15Q460N3 678 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 LRRC8EQ6NSJ5 796 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 RDH11Q8TC12 318 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 MAPK15Q8TD08 544 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 TSNARE1Q96NA8 513 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 MAN1C1Q9NR34 630 aa13.49□□□□□ -0.25
VPS33B-202ENST00000535906 A0A088AWK7 358 aa13.48□□□□□ -0.25
VPS33B-202ENST00000535906 A0A0D9SEW6 157 aa13.48□□□□□ -0.25
VPS33B-202ENST00000535906 MEI4A8MW99 385 aa13.48□□□□□ -0.25
VPS33B-202ENST00000535906 CCL22O00626 93 aa13.48□□□□□ -0.25
VPS33B-202ENST00000535906 COL6A2P12110 1019 aa13.48□□□□□ -0.25
VPS33B-202ENST00000535906 SLC6A4P31645 630 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms