RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 C18orf65Q6ZTR6 163 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 GALNT7Q86SF2 657 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 GALNT15Q8N3T1 639 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 SLC25A41Q8N5S1 370 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 FAM110DQ8TAY7 271 aaPredicted RBP3.77□□□□□ -1.81
USP48-215ENST00000534705 BICD2Q8TD16 824 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 LPAR1Q92633 364 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 ARRDC3Q96B67 414 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.77□□□□□ -1.81
USP48-215ENST00000534705 FRMD8Q9BZ67 464 aaPredicted RBP3.77□□□□□ -1.81
USP48-215ENST00000534705 AAMDCQ9H7C9 122 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 ACTR5Q9H9F9 607 aaPredicted RBP3.77□□□□□ -1.81
USP48-215ENST00000534705 MAP6D1Q9H9H5 199 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 Q9N2J8 555 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 PNRC2Q9NPJ4 139 aaKnown RBP3.77□□□□□ -1.81
USP48-215ENST00000534705 RASSF1Q9NS23 344 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 TMEM248Q9NWD8 314 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 ARL15Q9NXU5 204 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 ICKQ9UPZ9 632 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 MRC1P22897 1456 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 ARFGEF1Q9Y6D6 1849 aa3.77□□□□□ -1.81
USP48-215ENST00000534705 KDRP35968 1356 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 PARD3Q8TEW0 1356 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 PLEKHG2Q9H7P9 1386 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 IGSF1Q8N6C5 1336 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 ANKRD31Q8N7Z5 1873 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 TRBV5-7A0A0A0MS05 114 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 A0A1W2PPC1 479 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 IPO5O00410 1097 aaKnown RBP3.76□□□□□ -1.81
USP48-215ENST00000534705 CCNT1O60563 726 aaKnown RBP3.76□□□□□ -1.81
USP48-215ENST00000534705 TGFB3P10600 412 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 CHRNB1P11230 501 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 HOXB2P14652 356 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 CHN1P15882 459 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 CD53P19397 219 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 SLC16A2P36021 539 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 PNPLA4P41247 253 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 GAD2Q05329 585 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 ZBTB16Q05516 673 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 ALKBH1Q13686 389 aaKnown RBP3.76□□□□□ -1.81
USP48-215ENST00000534705 EIF4A2Q14240 407 aaKnown RBP3.76□□□□□ -1.81
USP48-215ENST00000534705 ENTPD8Q5MY95 495 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 Q5PR19 223 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 FAM83BQ5T0W9 1011 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 ATG9BQ674R7 924 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 CCDC174Q6PII3 467 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 PARM1Q6UWI2 310 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 KIAA1324Q6UXG2 1013 aaKnown RBP3.76□□□□□ -1.81
USP48-215ENST00000534705 B4GALNT4Q76KP1 1039 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 SCN4BQ8IWT1 228 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 ADHFE1Q8IWW8 467 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 PELI3Q8N2H9 469 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 FSIP1Q8NA03 581 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 SPPL3Q8TCT6 385 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 KTI12Q96EK9 354 aaPredicted RBP3.76□□□□□ -1.81
USP48-215ENST00000534705 MDFICQ9P1T7 246 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 SLC25A13Q9UJS0 675 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 SLC4A4Q9Y6R1 1079 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 KDM6AO15550 1401 aaPredicted RBP3.76□□□□□ -1.81
USP48-215ENST00000534705 ANKRD36CQ5JPF3 1778 aa3.76□□□□□ -1.81
USP48-215ENST00000534705 NRXN2Q9P2S2 1712 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 HMX3A6NHT5 357 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 E7EVH7 732 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 SMAD6O43541 496 aaKnown RBP3.75□□□□□ -1.81
USP48-215ENST00000534705 TK1P04183 234 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 T-ENOLP0DO92 83 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 ADD2P35612 726 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 CHKAP35790 457 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 TNNT2P45379 298 aaPredicted RBP3.75□□□□□ -1.81
USP48-215ENST00000534705 HTR6P50406 440 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 RPS6KA3P51812 740 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 THOC5Q13769 683 aaKnown RBP3.75□□□□□ -1.81
USP48-215ENST00000534705 PRKG1Q13976 671 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 GRAMD1BQ3KR37 738 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 C5orf22Q49AR2 442 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 ARL13AQ5H913 290 aaPredicted RBP3.75□□□□□ -1.81
USP48-215ENST00000534705 FAM171A1Q5VUB5 890 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 JMJD6Q6NYC1 403 aaPredicted RBP3.75□□□□□ -1.81
USP48-215ENST00000534705 AADACL2Q6P093 401 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 AAGABQ6PD74 315 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 PCGF5Q86SE9 256 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 TMTC2Q8N394 836 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 MYCT1Q8N699 235 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 HDAC7Q8WUI4 952 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 TMEM174Q8WUU8 243 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 ARPC5LQ9BPX5 153 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 PAGR1Q9BTK6 254 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 HDHD5Q9BXW7 423 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 ARHGAP39Q9C0H5 1083 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 SEPSECSQ9HD40 501 aaKnown RBP3.75□□□□□ -1.81
USP48-215ENST00000534705 TBC1D14Q9P2M4 693 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 KCND3Q9UK17 655 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 FBXO9Q9UK97 447 aaPredicted RBP3.75□□□□□ -1.81
USP48-215ENST00000534705 FBXO4Q9UKT5 387 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 OSGIN2Q9Y236 505 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 RCE1Q9Y256 329 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 LAMB2P55268 1798 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 ARFGEF2Q9Y6D5 1785 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 DICER1Q9UPY3 1922 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms