RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	FPGT	O14772	594 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	RAD51B	O15315	384 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	AQP9	O43315	295 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	NDUFB5	O43674	189 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	TCEA3	O75764	348 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	NEBL	O76041	1014 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	LSM8	O95777	96 aa	Known RBP	11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	SERPINC1	P01008	464 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	TGM2	P21980	687 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	CDC25B	P30305	580 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	CCNH	P51946	323 aa	Predicted RBP	11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	RNASE9	P60153	205 aa	Known RBP	11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	ARF5	P84085	180 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	NCAPH	Q15003	741 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	ZNF542P	Q5EBM4	170 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	WDR48	Q8TAF3	677 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	KCNE4	Q8WWG9	221 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	VOPP1	Q96AW1	172 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	CENPT	Q96BT3	561 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	ARHGEF26	Q96DR7	871 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	MRFAP1L1	Q96HT8	127 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	SPON2	Q9BUD6	331 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	BOC	Q9BWV1	1114 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	ATP13A1	Q9HD20	1204 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	TMPRSS4	Q9NRS4	437 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	KLF15	Q9UIH9	416 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	AJAP1	Q9UKB5	411 aa	Predicted RBP	11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	SNX10	Q9Y5X0	201 aa		11.73	□□□□□ -0.53
CTNND1-238	ENST00000534647	MGA	Q8IWI9	3026 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647		A0A1W2PNU3	283 aa	Predicted RBP	11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	IGLON5	A6NGN9	336 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	C16orf96	A6NNT2	1141 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	CDRT15L2	A8MXV6	281 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	SPINT1	O43278	529 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	SRGAP2	O75044	1071 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	MYF5	P13349	255 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	CYP11B1	P15538	503 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	JUND	P17535	347 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	FLT3	P36888	993 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	GEMIN4	P57678	1058 aa	Known RBP	11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	YPEL5	P62699	121 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	EIF2B5	Q13144	721 aa	Known RBP	11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	PDE1C	Q14123	709 aa	Predicted RBP	11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	PTK2B	Q14289	1009 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	ZNF805	Q5CZA5	627 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	PARS2	Q7L3T8	475 aa	Known RBP	11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	SPC24	Q8NBT2	197 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	ANKRD20A12P	Q8NF67	263 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	TTC9	Q92623	222 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	PRR11	Q96HE9	360 aa	Predicted RBP	11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	VCPIP1	Q96JH7	1222 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	OSBPL2	Q9H1P3	480 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	CAAP1	Q9H8G2	361 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	PLCB1	Q9NQ66	1216 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	FANCL	Q9NW38	375 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	HECA	Q9UBI9	543 aa	Predicted RBP	11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	SPAST	Q9UBP0	616 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	IPO11	Q9UI26	975 aa	Known RBP	11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	ENTPD2	Q9Y5L3	495 aa		11.72	□□□□□ -0.53
CTNND1-238	ENST00000534647	CPED1	A4D0V7	1026 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	LMO7DN	F2Z398	122 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	AREL1	O15033	823 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	KLK10	O43240	276 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	ZIC2	O95409	532 aa	Predicted RBP	11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	POP4	O95707	220 aa	Known RBP	11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	GSR	P00390	522 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	RBMS1	P29558	406 aa	Known RBP	11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	DNAJA1	P31689	397 aa	Known RBP	11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	ADRA1B	P35368	520 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	MAPKAPK2	P49137	400 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	RPIA	P49247	311 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	DNA2	P51530	1060 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	DRAP1	Q14919	205 aa	Predicted RBP	11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	NR0B2	Q15466	257 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	CDKN3	Q16667	212 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	MAN2A1	Q16706	1144 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	MYLK3	Q32MK0	819 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	TAF1B	Q53T94	588 aa	Predicted RBP	11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	OXLD1	Q5BKU9	147 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	TPRG1L	Q5T0D9	272 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	MANEAL	Q5VSG8	457 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	TRNP1	Q6NT89	227 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	GUSBP11	Q6P575	273 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	RBM44	Q6ZP01	1051 aa	Known RBP	11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	CLEC14A	Q86T13	490 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	NLRP14	Q86W24	1093 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	CREBRF	Q8IUR6	639 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	MSANTD4	Q8NCY6	345 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	ARHGEF2	Q92974	986 aa	Known RBP	11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	NAT6	Q93015	286 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	CFAP57	Q96MR6	1250 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	CITED4	Q96RK1	184 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	IL12RB2	Q99665	862 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	NAA15	Q9BXJ9	866 aa	Known RBP	11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	OSBPL1A	Q9BXW6	950 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	MAGEH1	Q9H213	219 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	PDCL3	Q9H2J4	239 aa		11.71	□□□□□ -0.53
CTNND1-238	ENST00000534647	NDST4	Q9H3R1	872 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms