RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 PNLIPP16233 465 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 VAMP7P51809 220 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 MAZP56270 477 aaKnown RBP10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 KRT83P78385 493 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 PPP3CAQ08209 521 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 NNTQ13423 1086 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 HLTFQ14527 1009 aaKnown RBP eCLIP10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 KLHL40Q2TBA0 621 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 FBXL22Q6P050 247 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 C22orf39Q6P5X5 142 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 RYBPQ8N488 228 aaPredicted RBP10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 OR6K2Q8NGY2 324 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 TMC2Q8TDI7 906 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 IRGQQ8WZA9 623 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 C19orf60Q96EN9 201 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 BTN2A3PQ96KV6 586 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 LRRC27Q9C0I9 530 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 ZMYND15Q9H091 742 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 BLZF1Q9H2G9 400 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 TNMDQ9H2S6 317 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 ZDHHC6Q9H6R6 413 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 TMEM9Q9P0T7 183 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 CGNQ9P2M7 1197 aaKnown RBP10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 KLQ9UEF7 1012 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 VPS51Q9UID3 782 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 VANGL2Q9ULK5 521 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 OR1A2Q9Y585 309 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 OR51B4Q9Y5P0 310 aa10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 TNRC6AQ8NDV7 1962 aaKnown RBP10.33□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 SVILO95425 2214 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 RHPN2P1A8MT19 583 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 A8MU76 341 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 KCNU1A8MYU2 1149 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 AP1G1O43747 822 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 NUDT21O43809 227 aaKnown RBP10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 SORBS2O94875 1100 aaKnown RBP10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 TNFP01375 233 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 SETSIPP0DME0 302 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 ITIH2P19823 946 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 CD1CP29017 333 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 LIMK2P53671 638 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 ABHD18Q0P651 414 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 BIRC2Q13490 618 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 IRF4Q15306 451 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 SNAP47Q5SQN1 464 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 TTC39BQ5VTQ0 682 aaPredicted RBP10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 SPECC1LQ69YQ0 1117 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 OGFOD3Q6PK18 319 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 ATP6V0D2Q8N8Y2 350 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 CCL4L1Q8NHW4 92 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 GOLGA5Q8TBA6 731 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 SEMA4DQ92854 862 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 DHX58Q96C10 678 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 RTP4Q96DX8 246 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 EEF2KMTQ96G04 330 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 PDXPQ96GD0 296 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 PSMB7Q99436 277 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 PRMT1Q99873 361 aaKnown RBP10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 HEPHQ9BQS7 1158 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 WRAP53Q9BUR4 548 aaKnown RBP10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 TRIM55Q9BYV6 548 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 SUDS3Q9H7L9 328 aaPredicted RBP10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 SLAMF7Q9NQ25 335 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 DMAC2Q9NW81 257 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.32□□□□□ -0.762e-6■■■■■ 42.9
NEDD8-MDP1-202ENST00000534348 SLC12A6Q9UHW9 1150 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 ENTPD4Q9Y227 616 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 POLHQ9Y253 713 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 COQ6Q9Y2Z9 468 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 ABCA2Q9BZC7 2435 aa10.32□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 A0A0D9SEW6 157 aa10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 C16orf96A6NNT2 1141 aa10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 TM7SF2O76062 418 aa10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 STK17BO94768 372 aa10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 ADCY5O95622 1261 aa10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 NR3C1P04150 777 aa10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 RHOCP08134 193 aa10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 HTR1BP28222 390 aa10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 DLSTP36957 453 aa10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 NOP2P46087 812 aaKnown RBP10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 LEPRP48357 1165 aaKnown RBP10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 CCNHP51946 323 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 PGDP52209 483 aa10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 PITX1P78337 314 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 MMP21Q8N119 569 aa10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 SCML4Q8N228 414 aa10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 TP53I13Q8NBR0 393 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 ASB12Q8WXK4 309 aa10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 RBM15Q96T37 977 aaKnown RBP eCLIP10.31□□□□□ -0.768e-6■□□□□ 8.4
NEDD8-MDP1-202ENST00000534348 C2orf49Q9BVC5 232 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 APMAPQ9HDC9 416 aa10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 MRPL40Q9NQ50 206 aaKnown RBP10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 KBTBD4Q9NVX7 518 aa10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 RCOR3Q9P2K3 495 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 MOSPD1Q9UJG1 213 aa10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 FRMD4BQ9Y2L6 1034 aa10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 RPS6KL1Q9Y6S9 549 aa10.31□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 ANKHD1Q8IWZ3 2542 aaKnown RBP10.3□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 A6NCN8 305 aa10.3□□□□□ -0.76
NEDD8-MDP1-202ENST00000534348 M0QYV0 167 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms