RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 GAREM1Q9H706 876 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 SCUBE2Q9NQ36 999 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 TFR2Q9UP52 801 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 HEY1Q9Y5J3 304 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 FADS3Q9Y5Q0 445 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 ALG6Q9Y672 507 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 SLCO1B1Q9Y6L6 691 aa13.54□□□□□ -0.24
CAPN1-227ENST00000533909 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-227ENST00000533909 RNF103O00237 685 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 VILLO15195 856 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 AP1G1O43747 822 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 NRDCO43847 1150 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 MAFKO60675 156 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 MAP3K6O95382 1288 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 GARSP41250 739 aaKnown RBP13.53□□□□□ -0.24
CAPN1-227ENST00000533909 CSNK1DP48730 415 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 VAV2P52735 878 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 POLR2LP62875 67 aaKnown RBP13.53□□□□□ -0.24
CAPN1-227ENST00000533909 DYNLT1P63172 113 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 NSUN2Q08J23 767 aaKnown RBP eCLIP13.53□□□□□ -0.24
CAPN1-227ENST00000533909 ELP6Q0PNE2 266 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 KIF5AQ12840 1032 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 IFI16Q16666 785 aaKnown RBP13.53□□□□□ -0.24
CAPN1-227ENST00000533909 HLA-BQ31612 363 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 LRRC73Q5JTD7 316 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 BRAT1Q6PJG6 821 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 ERMP1Q7Z2K6 904 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 CAMK1DQ8IU85 385 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 ACRBPQ8NEB7 543 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 HCAR2Q8TDS4 363 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 FAF2Q96CS3 445 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 MYOCQ99972 504 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 C1QTNF7Q9BXJ2 289 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 NT5MQ9NPB1 228 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 GDF3Q9NR23 364 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 DKK3Q9UBP4 350 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 TTLL3Q9Y4R7 772 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 SNX11Q9Y5W9 270 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 LAMA1P25391 3075 aa13.53□□□□□ -0.24
CAPN1-227ENST00000533909 ZNF487B1APH4 448 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 TLR4O00206 839 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 DFNA5O60443 496 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 HNRNPA2B1P22626 353 aaKnown RBP13.52□□□□□ -0.25
CAPN1-227ENST00000533909 NFKBIAP25963 317 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 ABL2P42684 1182 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 RGRP47804 291 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 GBE1Q04446 702 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 GALNT2Q10471 571 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 SLC14A1Q13336 389 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 TFDP2Q14188 446 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 SUZ12Q15022 739 aaKnown RBP13.52□□□□□ -0.25
CAPN1-227ENST00000533909 ZNF284Q2VY69 593 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 PPM1JQ5JR12 505 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 SEL1L3Q68CR1 1132 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 VSIG1Q86XK7 387 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 PQLC3Q8N755 202 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 TPCN2Q8NHX9 752 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 SETD7Q8WTS6 366 aaKnown RBP13.52□□□□□ -0.25
CAPN1-227ENST00000533909 PDCD6IPQ8WUM4 868 aaKnown RBP13.52□□□□□ -0.25
CAPN1-227ENST00000533909 ORAI3Q9BRQ5 295 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 SLC17A9Q9BYT1 436 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 GOLPH3Q9H4A6 298 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 EBF2Q9HAK2 575 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 DNAAF2Q9NVR5 837 aaKnown RBP13.52□□□□□ -0.25
CAPN1-227ENST00000533909 ITM2BQ9Y287 266 aa13.52□□□□□ -0.25
CAPN1-227ENST00000533909 NCOR2Q9Y618 2525 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 ADAMTS9Q9P2N4 1935 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 IGLON5A6NGN9 336 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 UPK3BL1B0FP48 263 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 UPK3BL2E5RIL1 263 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 PPP1R12AO14974 1030 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-227ENST00000533909 MATN3O15232 486 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 ZRANB2O95218 330 aaKnown RBP eCLIP13.51□□□□□ -0.25
CAPN1-227ENST00000533909 TIMP2P16035 220 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 CCNCP24863 283 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 CETN2P41208 172 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 ARRB1P49407 418 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-227ENST00000533909 NOVA1P51513 510 aaKnown RBP13.51□□□□□ -0.25
CAPN1-227ENST00000533909 FAM193AP78312 1265 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 OVGP1Q12889 678 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 HNRNPDQ14103 355 aaKnown RBP13.51□□□□□ -0.25
CAPN1-227ENST00000533909 PDK1Q15118 436 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 UGP2Q16851 508 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 TMEM259Q4ZIN3 620 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 CCDC181Q5TID7 509 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 KAZNQ674X7 775 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 BZW1Q7L1Q6 419 aaKnown RBP13.51□□□□□ -0.25
CAPN1-227ENST00000533909 IQCHQ86VS3 1027 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.51□□□□□ -0.25
CAPN1-227ENST00000533909 MFSD2AQ8NA29 543 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 KIAA1524Q8TCG1 905 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 KLHDC7BQ96G42 594 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 RBM41Q96IZ5 413 aaKnown RBP13.51□□□□□ -0.25
CAPN1-227ENST00000533909 DESI2Q9BSY9 194 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 WRAP53Q9BUR4 548 aaKnown RBP13.51□□□□□ -0.25
CAPN1-227ENST00000533909 POLR1EQ9GZS1 481 aaKnown RBP13.51□□□□□ -0.25
CAPN1-227ENST00000533909 FZD3Q9NPG1 666 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 TM7SF3Q9NS93 570 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 PCDHB9Q9Y5E1 797 aa13.51□□□□□ -0.25
CAPN1-227ENST00000533909 A0A1W2PQ67 120 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms