RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 ZNF280BQ86YH2 543 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 WDR75Q8IWA0 830 aaKnown RBP9.79□□□□□ -0.84
CHKA-207ENST00000533728 LMNTD2Q8IXW0 634 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 TEX26Q8N6G2 289 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 PPHLN1Q8NEY8 458 aaKnown RBP9.79□□□□□ -0.84
CHKA-207ENST00000533728 HASPINQ8TF76 798 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 OVCA2Q8WZ82 227 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 PEX13Q92968 403 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 SLC7A6OSQ96CW6 309 aaPredicted RBP9.79□□□□□ -0.84
CHKA-207ENST00000533728 BTN2A3PQ96KV6 586 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 ANKRD27Q96NW4 1050 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 GPR22Q99680 433 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 TTLL2Q9BWV7 592 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 CEP41Q9BYV8 373 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 SLC13A1Q9BZW2 595 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 SLC39A8Q9C0K1 460 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 SLC25A51Q9H1U9 297 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 NMUR1Q9HB89 426 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 ATP13A1Q9HD20 1204 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 TLR8Q9NR97 1041 aaKnown RBP9.79□□□□□ -0.84
CHKA-207ENST00000533728 SNX15Q9NRS6 342 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 ABI2Q9NYB9 513 aaPredicted RBP9.79□□□□□ -0.84
CHKA-207ENST00000533728 NCDNQ9UBB6 729 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 HSFX1Q9UBD0 423 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 COPG2Q9UBF2 871 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 HEY2Q9UBP5 337 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 HBS1LQ9Y450 684 aaKnown RBP9.79□□□□□ -0.84
CHKA-207ENST00000533728 PCDHB7Q9Y5E2 793 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 HS3ST4Q9Y661 456 aa9.79□□□□□ -0.84
CHKA-207ENST00000533728 ADAMTS20P59510 1910 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 ASXL3Q9C0F0 2248 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 CACNA1IQ9P0X4 2223 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 A0A0G2JND7 137 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 CARNS1A5YM72 827 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 ENPP3O14638 875 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 B4GALT3O60512 393 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 TBX10O75333 385 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 ALDH2P05091 517 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 SERPINA6P08185 405 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 KRT16P08779 473 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 ZDHHC11BP0C7U3 371 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 ERVK-10P10266 1014 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 MYL2P10916 166 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 OR1G1P47890 313 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 MAPKAPK2P49137 400 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 MNAT1P51948 309 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 CRADDP78560 199 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 ZBTB16Q05516 673 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 PCLAFQ15004 111 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 CTXN3Q4LDR2 81 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 WLSQ5T9L3 541 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 FSTL4Q6MZW2 842 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 RANBP10Q6VN20 620 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 ANKS3Q6ZW76 656 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 TMCO2Q7Z6W1 182 aaPredicted RBP9.78□□□□□ -0.84
CHKA-207ENST00000533728 STRA8Q7Z7C7 330 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 SCN4BQ8IWT1 228 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 UNC5BQ8IZJ1 945 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 ABI1Q8IZP0 508 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 ARHGAP24Q8N264 748 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 DBF4BQ8NFT6 615 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 PIWIL2Q8TC59 973 aaKnown RBP9.78□□□□□ -0.84
CHKA-207ENST00000533728 CALML6Q8TD86 181 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 PPP4R1Q8TF05 950 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 SCG3Q8WXD2 468 aaKnown RBP9.78□□□□□ -0.84
CHKA-207ENST00000533728 SEPT8Q92599 483 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 TADA1Q96BN2 335 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 PTCD3Q96EY7 689 aaKnown RBP9.78□□□□□ -0.84
CHKA-207ENST00000533728 VPS39Q96JC1 886 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 CASD1Q96PB1 797 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 TRIM56Q9BRZ2 755 aaKnown RBP9.78□□□□□ -0.84
CHKA-207ENST00000533728 C17orf80Q9BSJ5 609 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 FAM167BQ9BTA0 163 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 ZYG11BQ9C0D3 744 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 SIK2Q9H0K1 926 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 C12orf65Q9H3J6 166 aaKnown RBP9.78□□□□□ -0.84
CHKA-207ENST00000533728 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.78□□□□□ -0.84
CHKA-207ENST00000533728 DNAJC28Q9NX36 388 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 GGT7Q9UJ14 662 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 DCTN4Q9UJW0 460 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 RIMKLBQ9ULI2 386 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 TCAF1Q9Y4C2 921 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 SNX10Q9Y5X0 201 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 PSAT1Q9Y617 370 aa9.78□□□□□ -0.84
CHKA-207ENST00000533728 DFFAO00273 331 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 FCHO1O14526 889 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 PRKCGP05129 697 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 HAPLN1P10915 354 aaPredicted RBP9.77□□□□□ -0.85
CHKA-207ENST00000533728 TARSP26639 723 aaKnown RBP9.77□□□□□ -0.85
CHKA-207ENST00000533728 SLC1A6P48664 564 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 KPNA2P52292 529 aaKnown RBP9.77□□□□□ -0.85
CHKA-207ENST00000533728 IL10RBQ08334 325 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 ASPHQ12797 758 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 SF3A3Q12874 501 aaKnown RBP eCLIP9.77□□□□□ -0.859e-12■□□□□ 10.9
CHKA-207ENST00000533728 OVGP1Q12889 678 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 TCTN1Q2MV58 587 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 TSNAXIP1Q2TAA8 658 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 PARP15Q460N3 678 aa9.77□□□□□ -0.85
CHKA-207ENST00000533728 PREPLQ4J6C6 727 aaPredicted RBP9.77□□□□□ -0.85
CHKA-207ENST00000533728 CERCAMQ5T4B2 595 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms