RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 DSG4Q86SJ6 1040 aa17.69■□□□□ 0.42
PHRF1-205ENST00000533464 TTC7BQ86TV6 843 aa17.69■□□□□ 0.42
PHRF1-205ENST00000533464 FAM228AQ86W67 206 aa17.69■□□□□ 0.42
PHRF1-205ENST00000533464 SPPL2BQ8TCT7 592 aa17.69■□□□□ 0.42
PHRF1-205ENST00000533464 DQX1Q8TE96 717 aaKnown RBP17.69■□□□□ 0.42
PHRF1-205ENST00000533464 CHRAC1Q9NRG0 131 aa17.69■□□□□ 0.42
PHRF1-205ENST00000533464 GRHL1Q9NZI5 618 aa17.69■□□□□ 0.42
PHRF1-205ENST00000533464 RBPJLQ9UBG7 517 aa17.69■□□□□ 0.42
PHRF1-205ENST00000533464 CD3EAPO15446 510 aaKnown RBP17.69■□□□□ 0.42
PHRF1-205ENST00000533464 C22orf31O95567 290 aa17.69■□□□□ 0.42
PHRF1-205ENST00000533464 PTPN3P26045 913 aa17.69■□□□□ 0.42
PHRF1-205ENST00000533464 PPP2R1BP30154 601 aa17.69■□□□□ 0.42
PHRF1-205ENST00000533464 DHRSXQ8N5I4 330 aa17.69■□□□□ 0.42
PHRF1-205ENST00000533464 ZNF557Q8N988 423 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-205ENST00000533464 SPOCK2Q92563 424 aa17.69■□□□□ 0.42
PHRF1-205ENST00000533464 SNX27Q96L92 541 aa17.69■□□□□ 0.42
PHRF1-205ENST00000533464 TTPALQ9BTX7 342 aa17.69■□□□□ 0.42
PHRF1-205ENST00000533464 C9orf16Q9BUW7 83 aa17.69■□□□□ 0.42
PHRF1-205ENST00000533464 TMEM109Q9BVC6 243 aa17.69■□□□□ 0.42
PHRF1-205ENST00000533464 STN1Q9H668 368 aaKnown RBP17.69■□□□□ 0.42
PHRF1-205ENST00000533464 CTPS1P17812 591 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 FGFR3P22607 806 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 CDC25CP30307 473 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 VSTM1Q6UX27 236 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 HJURPQ8NCD3 748 aaPredicted RBP17.68■□□□□ 0.42
PHRF1-205ENST00000533464 QKIQ96PU8 341 aaKnown RBP eCLIP17.68■□□□□ 0.42
PHRF1-205ENST00000533464 ASAH2Q9NR71 780 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 PRDM4Q9UKN5 801 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 ZNF839A8K0R7 811 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 PRR5-ARHGAP8B1AHC4 643 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 HS6ST1O60243 411 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 GRIA3P42263 894 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 SLC5A3P53794 718 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 ARHGAP8P85298 464 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 DEFB115Q30KQ5 88 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 ZDHHC13Q8IUH4 622 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 RP9Q8TA86 221 aaKnown RBP17.68■□□□□ 0.42
PHRF1-205ENST00000533464 DNAJB14Q8TBM8 379 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 ELMO1Q92556 727 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 HNRNPABQ99729 332 aaKnown RBP17.68■□□□□ 0.42
PHRF1-205ENST00000533464 SDCBP2Q9H190 292 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 VPS45Q9NRW7 570 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 FAM208AQ9UK61 1670 aaKnown RBP17.68■□□□□ 0.42
PHRF1-205ENST00000533464 SNTNA6NMZ2 147 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 PMM2O15305 246 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 TGM3Q08188 693 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 SLC24A5Q71RS6 500 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 MTSS1LQ765P7 747 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 LPCAT2Q7L5N7 544 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 DDHD1Q8NEL9 900 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 RCN3Q96D15 328 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 BTN2A3PQ96KV6 586 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 AGO3Q9H9G7 860 aaKnown RBP17.68■□□□□ 0.42
PHRF1-205ENST00000533464 ACADMP11310 421 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 IMPDH2P12268 514 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 LMO2P25791 158 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 CRHR1P34998 444 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 ADGRD1Q6QNK2 874 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 DLK2Q6UY11 383 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 ACTRT2Q8TDY3 377 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 PCED1BQ96HM7 432 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 NFKBIZQ9BYH8 718 aa17.68■□□□□ 0.42
PHRF1-205ENST00000533464 TBC1D3BA6NDS4 549 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 ULK1O75385 1050 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 ASGR1P07306 291 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 GSSP48637 474 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 GMIPQ9P107 970 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 CHKBQ9Y259 395 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 MYRFQ9Y2G1 1151 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 DUSP11O75319 330 aaKnown RBP17.67■□□□□ 0.42
PHRF1-205ENST00000533464 ATG7O95352 703 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 KRT8P05787 483 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 ASPAP45381 313 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 NDUFV1P49821 464 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 POM121L1PQ3SYA9 428 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 INTS6LQ5JSJ4 861 aaKnown RBP17.67■□□□□ 0.42
PHRF1-205ENST00000533464 MFSD4BQ5TF39 518 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 SIAH1Q8IUQ4 282 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 SUSD6Q92537 303 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 ANAPC2Q9UJX6 822 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 NFKBIEO00221 500 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 CNOT3O75175 753 aaKnown RBP17.67■□□□□ 0.42
PHRF1-205ENST00000533464 LRIG2O94898 1065 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 HSMCR30P0CW71 290 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 KIAA2013Q8IYS2 634 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 REPS1Q96D71 796 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 PAPOLBQ9NRJ5 636 aaKnown RBP17.67■□□□□ 0.42
PHRF1-205ENST00000533464 PARP4Q9UKK3 1724 aaKnown RBP17.67■□□□□ 0.42
PHRF1-205ENST00000533464 RPTORQ8N122 1335 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 CYP3A5P20815 502 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 SP100P23497 879 aaPredicted RBP17.67■□□□□ 0.42
PHRF1-205ENST00000533464 SERPINB1P30740 379 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 BLVRAP53004 296 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 SPRYD7Q5W111 196 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 C10orf53Q8N6V4 93 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 BTN2A2Q8WVV5 523 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 CDH19Q9H159 772 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 FAM124BQ9H5Z6 455 aaPredicted RBP17.67■□□□□ 0.42
PHRF1-205ENST00000533464 ZFP14Q9HCL3 533 aa17.67■□□□□ 0.42
PHRF1-205ENST00000533464 SPAG4Q9NPE6 437 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms