RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 DAAM2Q86T65 1068 aa20.68■□□□□ 0.9
CCS-208ENST00000533244 ZSCAN30Q86W11 494 aa20.68■□□□□ 0.9
CCS-208ENST00000533244 KATNAL2Q8IYT4 538 aa20.68■□□□□ 0.9
CCS-208ENST00000533244 MINDY1Q8N5J2 469 aa20.68■□□□□ 0.9
CCS-208ENST00000533244 RNF25Q96BH1 459 aaPredicted RBP20.68■□□□□ 0.9
CCS-208ENST00000533244 HDAC11Q96DB2 347 aa20.68■□□□□ 0.9
CCS-208ENST00000533244 ECHDC3Q96DC8 303 aa20.68■□□□□ 0.9
CCS-208ENST00000533244 SERAC1Q96JX3 654 aa20.68■□□□□ 0.9
CCS-208ENST00000533244 DESI2Q9BSY9 194 aa20.68■□□□□ 0.9
CCS-208ENST00000533244 GTPBP2Q9BX10 602 aaKnown RBP20.68■□□□□ 0.9
CCS-208ENST00000533244 ASCC3Q8N3C0 2202 aaKnown RBP20.67■□□□□ 0.9
CCS-208ENST00000533244 KNL1Q8NG31 2342 aa20.67■□□□□ 0.9
CCS-208ENST00000533244 TSPAN6O43657 245 aa20.67■□□□□ 0.9
CCS-208ENST00000533244 MAP3K6O95382 1288 aa20.67■□□□□ 0.9
CCS-208ENST00000533244 WNT1P04628 370 aa20.67■□□□□ 0.9
CCS-208ENST00000533244 TNNT1P13805 278 aa20.67■□□□□ 0.9
CCS-208ENST00000533244 TIMP2P16035 220 aa20.67■□□□□ 0.9
CCS-208ENST00000533244 MX2P20592 715 aa20.67■□□□□ 0.9
CCS-208ENST00000533244 CCNCP24863 283 aa20.67■□□□□ 0.9
CCS-208ENST00000533244 MARCKSL1P49006 195 aa20.67■□□□□ 0.9
CCS-208ENST00000533244 SUOXP51687 545 aa20.67■□□□□ 0.9
CCS-208ENST00000533244 HNRNPDQ14103 355 aaKnown RBP20.67■□□□□ 0.9
CCS-208ENST00000533244 MARC1Q5VT66 337 aa20.67■□□□□ 0.9
CCS-208ENST00000533244 SEL1L3Q68CR1 1132 aa20.67■□□□□ 0.9
CCS-208ENST00000533244 LAYNQ6UX15 382 aa20.67■□□□□ 0.9
CCS-208ENST00000533244 CAMK1DQ8IU85 385 aa20.67■□□□□ 0.9
CCS-208ENST00000533244 LRRC57Q8N9N7 239 aa20.67■□□□□ 0.9
CCS-208ENST00000533244 OR2I1PQ8NGU4 316 aa20.67■□□□□ 0.9
CCS-208ENST00000533244 ATP13A3Q9H7F0 1226 aa20.67■□□□□ 0.9
CCS-208ENST00000533244 ANKRD6Q9Y2G4 727 aa20.67■□□□□ 0.9
CCS-208ENST00000533244 ANKRD36A6QL64 1941 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 APOL1O14791 398 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 MATN3O15232 486 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 PCDH8O95206 1070 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 CD38P28907 300 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 SERPINA4P29622 427 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 CTSKP43235 329 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 MMP13P45452 471 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 ATXN3P54252 364 aaPredicted RBP20.66■□□□□ 0.9
CCS-208ENST00000533244 RPS21P63220 83 aaKnown RBP20.66■□□□□ 0.9
CCS-208ENST00000533244 KIF19Q2TAC6 998 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 TIGD7Q6NT04 549 aaPredicted RBP20.66■□□□□ 0.9
CCS-208ENST00000533244 BRAT1Q6PJG6 821 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 IL27RAQ6UWB1 636 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 KIAA1328Q86T90 577 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 ZSWIM9Q86XI8 627 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 BBS5Q8N3I7 341 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 TMEM145Q8NBT3 493 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 NSMCE1Q8WV22 266 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 SPOCK2Q92563 424 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 KRT35Q92764 455 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 FEM1CQ96JP0 617 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 NUDCD1Q96RS6 583 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 GGT7Q9UJ14 662 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 ITM2BQ9Y287 266 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 TRPM6Q9BX84 2022 aa20.66■□□□□ 0.9
CCS-208ENST00000533244 A0A0U1RQJ8 604 aa20.65■□□□□ 0.9
CCS-208ENST00000533244 PRAMEF26H0Y7S4 382 aa20.65■□□□□ 0.9
CCS-208ENST00000533244 TRAFD1O14545 582 aaPredicted RBP20.65■□□□□ 0.9
CCS-208ENST00000533244 ZFXP17010 805 aaPredicted RBP20.65■□□□□ 0.9
CCS-208ENST00000533244 CTNNA1P35221 906 aaKnown RBP20.65■□□□□ 0.9
CCS-208ENST00000533244 SCNN1BP51168 640 aa20.65■□□□□ 0.9
CCS-208ENST00000533244 FGL2Q14314 439 aa20.65■□□□□ 0.9
CCS-208ENST00000533244 RALGPS1Q5JS13 557 aa20.65■□□□□ 0.9
CCS-208ENST00000533244 ALG1LQ6GMV1 187 aa20.65■□□□□ 0.9
CCS-208ENST00000533244 SPOCD1Q6ZMY3 1216 aa20.65■□□□□ 0.9
CCS-208ENST00000533244 TTC7BQ86TV6 843 aa20.65■□□□□ 0.9
CCS-208ENST00000533244 TXLNBQ8N3L3 684 aa20.65■□□□□ 0.9
CCS-208ENST00000533244 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.65■□□□□ 0.9
CCS-208ENST00000533244 OLFM3Q96PB7 478 aa20.65■□□□□ 0.9
CCS-208ENST00000533244 AASDHPPTQ9NRN7 309 aa20.65■□□□□ 0.9
CCS-208ENST00000533244 AMACRQ9UHK6 382 aa20.65■□□□□ 0.9
CCS-208ENST00000533244 SNX11Q9Y5W9 270 aa20.65■□□□□ 0.9
CCS-208ENST00000533244 TP53BP1Q12888 1972 aaPredicted RBP20.65■□□□□ 0.9
CCS-208ENST00000533244 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.64■□□□□ 0.89
CCS-208ENST00000533244 GRID2IPA4D2P6 1211 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 UPK3BL1B0FP48 263 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 UPK3BL2E5RIL1 263 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 CER1O95813 267 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 PRLRP16471 622 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 BCL2L1Q07817 233 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 PPIDQ08752 370 aaKnown RBP20.64■□□□□ 0.89
CCS-208ENST00000533244 KIF5AQ12840 1032 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 UGP2Q16851 508 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 ODF2Q5BJF6 829 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 IQCHQ86VS3 1027 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 RFX6Q8HWS3 928 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 MFSD2AQ8NA29 543 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 CCDC112Q8NEF3 446 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 EXD1Q8NHP7 514 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 ASB12Q8WXK4 309 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 KLK6Q92876 244 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 C1QTNF2Q9BXJ5 285 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 MAK16Q9BXY0 300 aaKnown RBP20.64■□□□□ 0.89
CCS-208ENST00000533244 GRPEL1Q9HAV7 217 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 TRIM10Q9UDY6 481 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.64■□□□□ 0.89
CCS-208ENST00000533244 PCDHA3Q9Y5H8 950 aa20.64■□□□□ 0.89
CCS-208ENST00000533244 CNOT1A5YKK6 2376 aaKnown RBP20.64■□□□□ 0.89
CCS-208ENST00000533244 hCG_1818297A0A087WSY0 165 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms