RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 PNPLA1Q8N8W4 532 aa30.65■■■□□ 2.5
SSSCA1-207ENST00000533115 FAM174AQ8TBP5 190 aa30.65■■■□□ 2.5
SSSCA1-207ENST00000533115 IPO11Q9UI26 975 aaKnown RBP30.65■■■□□ 2.5
SSSCA1-207ENST00000533115 AKR1B10O60218 316 aa30.64■■■□□ 2.5
SSSCA1-207ENST00000533115 PIGNO95427 931 aa30.64■■■□□ 2.5
SSSCA1-207ENST00000533115 TIMP2P16035 220 aa30.64■■■□□ 2.5
SSSCA1-207ENST00000533115 BNIP3Q12983 259 aa30.64■■■□□ 2.5
SSSCA1-207ENST00000533115 HADHQ16836 314 aaKnown RBP30.64■■■□□ 2.5
SSSCA1-207ENST00000533115 LRRC73Q5JTD7 316 aa30.64■■■□□ 2.5
SSSCA1-207ENST00000533115 TSEN2Q8NCE0 465 aaKnown RBP30.64■■■□□ 2.5
SSSCA1-207ENST00000533115 OR13H1Q8NG92 308 aa30.64■■■□□ 2.5
SSSCA1-207ENST00000533115 HCAR2Q8TDS4 363 aa30.64■■■□□ 2.5
SSSCA1-207ENST00000533115 ADAMTS14Q8WXS8 1223 aa30.64■■■□□ 2.5
SSSCA1-207ENST00000533115 TSC1Q92574 1164 aa30.64■■■□□ 2.5
SSSCA1-207ENST00000533115 CINPQ9BW66 212 aaPredicted RBP30.64■■■□□ 2.5
SSSCA1-207ENST00000533115 RAD51BO15315 384 aa30.63■■■□□ 2.49
SSSCA1-207ENST00000533115 TNFSF14O43557 240 aa30.63■■■□□ 2.49
SSSCA1-207ENST00000533115 ATXN1LP0C7T5 689 aaKnown RBP30.63■■■□□ 2.49
SSSCA1-207ENST00000533115 CSNK1DP48730 415 aa30.63■■■□□ 2.49
SSSCA1-207ENST00000533115 KRT81Q14533 505 aa30.63■■■□□ 2.49
SSSCA1-207ENST00000533115 ASB12Q8WXK4 309 aa30.63■■■□□ 2.49
SSSCA1-207ENST00000533115 BMFQ96LC9 184 aa30.63■■■□□ 2.49
SSSCA1-207ENST00000533115 LENG8Q96PV6 779 aaPredicted RBP30.63■■■□□ 2.49
SSSCA1-207ENST00000533115 TUBGCP5Q96RT8 1024 aa30.63■■■□□ 2.49
SSSCA1-207ENST00000533115 CHP1Q99653 195 aa30.63■■■□□ 2.49
SSSCA1-207ENST00000533115 CALN1Q9BXU9 219 aa30.63■■■□□ 2.49
SSSCA1-207ENST00000533115 SUV39H2Q9H5I1 410 aa30.63■■■□□ 2.49
SSSCA1-207ENST00000533115 TOR4AQ9NXH8 423 aa30.63■■■□□ 2.49
SSSCA1-207ENST00000533115 NEUROG3Q9Y4Z2 214 aa30.63■■■□□ 2.49
SSSCA1-207ENST00000533115 A6NNZ2 444 aa30.62■■■□□ 2.49
SSSCA1-207ENST00000533115 BUB1BO60566 1050 aaPredicted RBP30.62■■■□□ 2.49
SSSCA1-207ENST00000533115 PROSCO94903 275 aa30.62■■■□□ 2.49
SSSCA1-207ENST00000533115 RGRP47804 291 aa30.62■■■□□ 2.49
SSSCA1-207ENST00000533115 CDH6P55285 790 aa30.62■■■□□ 2.49
SSSCA1-207ENST00000533115 SRLQ86TD4 932 aa30.62■■■□□ 2.49
SSSCA1-207ENST00000533115 ZNF641Q96N77 438 aaPredicted RBP30.62■■■□□ 2.49
SSSCA1-207ENST00000533115 ZNF599Q96NL3 588 aa30.62■■■□□ 2.49
SSSCA1-207ENST00000533115 RCOR3Q9P2K3 495 aaPredicted RBP30.62■■■□□ 2.49
SSSCA1-207ENST00000533115 FTSJ1Q9UET6 329 aa30.62■■■□□ 2.49
SSSCA1-207ENST00000533115 LCMT1Q9UIC8 334 aa30.62■■■□□ 2.49
SSSCA1-207ENST00000533115 KLK13Q9UKR3 277 aa30.62■■■□□ 2.49
SSSCA1-207ENST00000533115 TSPAN11A1L157 253 aa30.61■■■□□ 2.49
SSSCA1-207ENST00000533115 TMEM253P0C7T8 217 aa30.61■■■□□ 2.49
SSSCA1-207ENST00000533115 XPAP23025 273 aaPredicted RBP30.61■■■□□ 2.49
SSSCA1-207ENST00000533115 SUOXP51687 545 aa30.61■■■□□ 2.49
SSSCA1-207ENST00000533115 NSUN2Q08J23 767 aaKnown RBP eCLIP30.61■■■□□ 2.49
SSSCA1-207ENST00000533115 KYAT3Q6YP21 454 aaKnown RBP30.61■■■□□ 2.49
SSSCA1-207ENST00000533115 Q6ZSR6 202 aa30.61■■■□□ 2.49
SSSCA1-207ENST00000533115 CPNE8Q86YQ8 564 aa30.61■■■□□ 2.49
SSSCA1-207ENST00000533115 FAM71BQ8TC56 605 aa30.61■■■□□ 2.49
SSSCA1-207ENST00000533115 CCDC42Q96M95 316 aa30.61■■■□□ 2.49
SSSCA1-207ENST00000533115 KLF6Q99612 283 aaPredicted RBP30.61■■■□□ 2.49
SSSCA1-207ENST00000533115 NHEJ1Q9H9Q4 299 aaPredicted RBP30.61■■■□□ 2.49
SSSCA1-207ENST00000533115 KLHL11Q9NVR0 708 aa30.61■■■□□ 2.49
SSSCA1-207ENST00000533115 SPEGQ15772 3267 aa30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 POM121BA6NF01 834 aa30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 ITIH2P19823 946 aa30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 IL4RP24394 825 aa30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 SERPINB6P35237 376 aa30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 LBRQ14739 615 aaKnown RBP30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 TMCO4Q5TGY1 634 aa30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 SARM1Q6SZW1 724 aa30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 KANSL1Q7Z3B3 1105 aa30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 PTAR1Q7Z6K3 402 aaPredicted RBP30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 DCP2Q8IU60 420 aaKnown RBP30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 CAMK1DQ8IU85 385 aa30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 CNGA4Q8IV77 575 aa30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 SLC22A18ASQ8N1D0 253 aa30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 EID2Q8N6I1 236 aa30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 DENND6BQ8NEG7 585 aa30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 CXorf40AQ8TE69 158 aa30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 ATP13A3Q9H7F0 1226 aa30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 SEPT3Q9UH03 358 aa30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 EPG5Q9HCE0 2579 aa30.6■■■□□ 2.49
SSSCA1-207ENST00000533115 COL5A1P20908 1838 aaPredicted RBP30.59■■■□□ 2.49
SSSCA1-207ENST00000533115 FAM221BA6H8Z2 402 aa30.59■■■□□ 2.49
SSSCA1-207ENST00000533115 GOLGA8CPA6NN73 597 aa30.59■■■□□ 2.49
SSSCA1-207ENST00000533115 FPGTO14772 594 aa30.59■■■□□ 2.49
SSSCA1-207ENST00000533115 MMP20O60882 483 aa30.59■■■□□ 2.49
SSSCA1-207ENST00000533115 DKK1O94907 266 aa30.59■■■□□ 2.49
SSSCA1-207ENST00000533115 CD48P09326 243 aa30.59■■■□□ 2.49
SSSCA1-207ENST00000533115 RENBPP51606 427 aa30.59■■■□□ 2.49
SSSCA1-207ENST00000533115 ARSEP51690 589 aa30.59■■■□□ 2.49
SSSCA1-207ENST00000533115 ELP6Q0PNE2 266 aa30.59■■■□□ 2.49
SSSCA1-207ENST00000533115 TBX2Q13207 712 aaPredicted RBP30.59■■■□□ 2.49
SSSCA1-207ENST00000533115 CFAP58Q5T655 872 aa30.59■■■□□ 2.49
SSSCA1-207ENST00000533115 BRAT1Q6PJG6 821 aa30.59■■■□□ 2.49
SSSCA1-207ENST00000533115 PSKH2Q96QS6 385 aa30.59■■■□□ 2.49
SSSCA1-207ENST00000533115 GPR27Q9NS67 375 aa30.59■■■□□ 2.49
SSSCA1-207ENST00000533115 SPTLC3Q9NUV7 552 aa30.59■■■□□ 2.49
SSSCA1-207ENST00000533115 MSRB2Q9Y3D2 182 aa30.59■■■□□ 2.49
SSSCA1-207ENST00000533115 AKR1B15C9JRZ8 316 aaPredicted RBP30.58■■■□□ 2.49
SSSCA1-207ENST00000533115 MUSKO15146 869 aa30.58■■■□□ 2.49
SSSCA1-207ENST00000533115 SERPINA4P29622 427 aa30.58■■■□□ 2.49
SSSCA1-207ENST00000533115 GJC1P36383 396 aa30.58■■■□□ 2.49
SSSCA1-207ENST00000533115 SLC10A7Q0GE19 358 aa30.58■■■□□ 2.49
SSSCA1-207ENST00000533115 MMRN1Q13201 1228 aa30.58■■■□□ 2.49
SSSCA1-207ENST00000533115 UGP2Q16851 508 aa30.58■■■□□ 2.49
SSSCA1-207ENST00000533115 TMEM52BQ4KMG9 183 aa30.58■■■□□ 2.49
SSSCA1-207ENST00000533115 ATP13A4Q4VNC1 1196 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms