RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 C2orf27AQ580R0 203 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 CCDC81Q6ZN84 652 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 MILR1Q7Z6M3 343 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 GPSM1Q86YR5 675 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 OR52K1Q8NGK4 314 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 SUSD3Q96L08 255 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 CNBD2Q96M20 576 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 CHST7Q9NS84 486 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 SH3BP4Q9P0V3 963 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 PCDHGC5Q9Y5F6 944 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 A0A087X1B8 175 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 RASGRP1O95267 797 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 ADRA1BP35368 520 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 LPIN1Q14693 890 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 ATAD3BQ5T9A4 648 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 TAF8Q7Z7C8 310 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 SLC39A8Q9C0K1 460 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 MID1IP1Q9NPA3 183 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 EVLQ9UI08 416 aaPredicted RBP11.39□□□□□ -0.59
PTPRK-221ENST00000532331 PCDHA11Q9Y5I1 949 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 PCCBP05166 539 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 FGF1P05230 155 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 SLC11A1P49279 550 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 CDK16Q00536 496 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 UBE3AQ05086 875 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 PWP1Q13610 501 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 HMGB4Q8WW32 186 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 KLHL5Q96PQ7 755 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 ASB2Q96Q27 587 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 KCTD14Q9BQ13 255 aaPredicted RBP11.38□□□□□ -0.59
PTPRK-221ENST00000532331 NKX2-4Q9H2Z4 354 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 GDF3Q9NR23 364 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 CHADO15335 359 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 ASLP04424 464 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 FCGR1AP12314 374 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 CORO7P57737 925 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 SEMA4DQ92854 862 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 COPS8Q99627 209 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 SIKE1Q9BRV8 207 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 ENTPD4Q9Y227 616 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 VPS4BO75351 444 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 VIPP01282 170 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 MRPS35P82673 323 aaKnown RBP11.38□□□□□ -0.59
PTPRK-221ENST00000532331 ZNF786Q8N393 782 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 NDRG1Q92597 394 aaKnown RBP11.38□□□□□ -0.59
PTPRK-221ENST00000532331 CATSPER2Q96P56 530 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 SAGE1Q9NXZ1 904 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 ASF1AQ9Y294 204 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 PTPN4P29074 926 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 TIE1P35590 1138 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 SCTRP47872 440 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 TM4SF4P48230 202 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 YBEYP58557 167 aaPredicted RBP11.38□□□□□ -0.59
PTPRK-221ENST00000532331 SLC20A2Q08357 652 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 ILF3Q12906 894 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTPRK-221ENST00000532331 STXBP5Q5T5C0 1151 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 PRMT9Q6P2P2 845 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 FOXR2Q6PJQ5 311 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 KYQ8NBH2 561 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 RIN3Q8TB24 985 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 IRF7Q92985 503 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 ACDQ96AP0 544 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 HEPHQ9BQS7 1158 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 RXFP1Q9HBX9 757 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 IMP3Q9NV31 184 aaKnown RBP11.38□□□□□ -0.59
PTPRK-221ENST00000532331 KLHL28Q9NXS3 571 aa11.38□□□□□ -0.59
PTPRK-221ENST00000532331 POP4O95707 220 aaKnown RBP11.37□□□□□ -0.59
PTPRK-221ENST00000532331 NUDT14O95848 222 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 MT-CO1P00395 513 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 PIRTP0C851 137 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 ATP6V1B2P21281 511 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 HTR7P34969 479 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 POU5F1Q01860 360 aaKnown RBP11.37□□□□□ -0.59
PTPRK-221ENST00000532331 MRPL28Q13084 256 aaKnown RBP11.37□□□□□ -0.59
PTPRK-221ENST00000532331 SPDYCQ5MJ68 293 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 CYB5D1Q6P9G0 228 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 TMEM192Q8IY95 271 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 NKAPQ8N5F7 415 aaKnown RBP11.37□□□□□ -0.59
PTPRK-221ENST00000532331 FNDC5Q8NAU1 212 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 METTL6Q8TCB7 284 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 IKZF4Q9H2S9 585 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 CYLDQ9NQC7 956 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 INTS7Q9NVH2 962 aaKnown RBP11.37□□□□□ -0.59
PTPRK-221ENST00000532331 COMMD8Q9NX08 183 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 USE1Q9NZ43 259 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 RHPN2P1A8MT19 583 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 HS6ST1O60243 411 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 RGS1Q08116 209 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 FAAP100Q0VG06 881 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 SPIDRQ14159 915 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 MIIPQ5JXC2 388 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 GRASPQ7Z6J2 395 aaPredicted RBP11.37□□□□□ -0.59
PTPRK-221ENST00000532331 TMEM245Q9H330 911 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 CRYBG1Q9Y4K1 1723 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 ENPP3O14638 875 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 FPGTO14772 594 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 SOD2P04179 222 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 IQCF3P0C7M6 154 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 IDSP22304 550 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 PCYT1AP49585 367 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms