RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 DOLKQ9UPQ8 538 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 NEU2Q9Y3R4 380 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 MTF2Q9Y483 593 aaPredicted RBP12.67□□□□□ -0.38
COPB1-208ENST00000532088 ACTL7AQ9Y615 435 aa12.67□□□□□ -0.38
COPB1-208ENST00000532088 CKAP5Q14008 2032 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 A0A1W2PQ67 120 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 INSIG1O15503 277 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 SYNCRIPO60506 623 aaKnown RBP12.66□□□□□ -0.38
COPB1-208ENST00000532088 ADAM23O75077 832 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 SOCS5O75159 536 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 PAPSS2O95340 614 aaPredicted RBP12.66□□□□□ -0.38
COPB1-208ENST00000532088 ZIC2O95409 532 aaPredicted RBP12.66□□□□□ -0.38
COPB1-208ENST00000532088 EPHX1P07099 455 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 HOXB2P14652 356 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 CD68P34810 354 aaPredicted RBP12.66□□□□□ -0.38
COPB1-208ENST00000532088 FDFT1P37268 417 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 KCNJ1P48048 391 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 DGKEP52429 567 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 TUBB4BP68371 445 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 ZBTB16Q05516 673 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 MYLK3Q32MK0 819 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 C2orf27AQ580R0 203 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 NCEH1Q6PIU2 408 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 LEKR1Q6ZMV7 388 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 Q6ZVU0 165 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 GSTA5Q7RTV2 222 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 DSG4Q86SJ6 1040 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 SRLQ86TD4 932 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 MMGT1Q8N4V1 131 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 TXNDC5Q8NBS9 432 aaKnown RBP12.66□□□□□ -0.38
COPB1-208ENST00000532088 TMIEQ8NEW7 156 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 OR2T3Q8NH03 318 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 ARRDC2Q8TBH0 407 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 OR8D1Q8WZ84 308 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 TADA1Q96BN2 335 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 IMP4Q96G21 291 aaKnown RBP12.66□□□□□ -0.38
COPB1-208ENST00000532088 ZNF641Q96N77 438 aaPredicted RBP12.66□□□□□ -0.38
COPB1-208ENST00000532088 ACOX2Q99424 681 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 HEPHQ9BQS7 1158 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 OSBPL1AQ9BXW6 950 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 C10orf88Q9H8K7 445 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 PRSS16Q9NQE7 514 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 DLGAP2Q9P1A6 1054 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 HECAQ9UBI9 543 aaPredicted RBP12.66□□□□□ -0.38
COPB1-208ENST00000532088 SHROOM3Q8TF72 1996 aa12.66□□□□□ -0.38
COPB1-208ENST00000532088 A0A1W2PQF6 199 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 GOLGA6CA6NDK9 693 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 GOLGA6BA6NDN3 693 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 ERI2A8K979 691 aaKnown RBP12.65□□□□□ -0.38
COPB1-208ENST00000532088 NDC80O14777 642 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 MUSKO15146 869 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 PSMD3O43242 534 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 LZTS3O60299 673 aaPredicted RBP12.65□□□□□ -0.38
COPB1-208ENST00000532088 LILRA1O75019 489 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 SIN3BO75182 1162 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 ANXA9O76027 345 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 PRNPP04156 253 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 SERPINF2P08697 491 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 GOLGA6DP0CG33 693 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 CA4P22748 312 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 PTGIRP43119 386 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 NUMBP49757 651 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 SMCPP49901 116 aaPredicted RBP12.65□□□□□ -0.38
COPB1-208ENST00000532088 CCNHP51946 323 aaPredicted RBP12.65□□□□□ -0.38
COPB1-208ENST00000532088 DR1Q01658 176 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 PTK6Q13882 451 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 PRPSAP1Q14558 356 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 CRY1Q16526 586 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 GLE1Q53GS7 698 aaKnown RBP12.65□□□□□ -0.38
COPB1-208ENST00000532088 DPY19L3Q6ZPD9 716 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 Q6ZS52 159 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 ARHGEF18Q6ZSZ5 1173 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 B4GALNT4Q76KP1 1039 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 FLCNQ8NFG4 579 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 CCDC110Q8TBZ0 833 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 AGAP3Q96P47 875 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 KRT12Q99456 494 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 TM6SF2Q9BZW4 377 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 RSPH9Q9H1X1 276 aaPredicted RBP12.65□□□□□ -0.38
COPB1-208ENST00000532088 TNKS2Q9H2K2 1166 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 POLMQ9NP87 494 aaPredicted RBP12.65□□□□□ -0.38
COPB1-208ENST00000532088 GOLGA6AQ9NYA3 693 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 IL36AQ9UHA7 158 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 RSPH14Q9UHP6 348 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 SCML1Q9UN30 329 aa12.65□□□□□ -0.38
COPB1-208ENST00000532088 AAR2Q9Y312 384 aaKnown RBP12.65□□□□□ -0.38
COPB1-208ENST00000532088 C1QTNF3-AMACRE9PGA6 284 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 HTRA2O43464 458 aaPredicted RBP12.64□□□□□ -0.39
COPB1-208ENST00000532088 RNASEH1O60930 286 aaKnown RBP12.64□□□□□ -0.39
COPB1-208ENST00000532088 IFNB1P01574 187 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 EPOP01588 193 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 KRT14P02533 472 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 HLA-EP13747 358 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 NFKB1P19838 968 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 SERPINA4P29622 427 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 RPL22P35268 128 aaKnown RBP12.64□□□□□ -0.39
COPB1-208ENST00000532088 RGRP47804 291 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 SCNN1BP51168 640 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 CCR3P51677 355 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 GEMP55040 296 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms