RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 ST8SIA6P61647 398 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 IL10RBQ08334 325 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 KLF1Q13351 362 aaPredicted RBP11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 NUMA1Q14980 2115 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 NOMO1Q15155 1222 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 MYLKQ15746 1914 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 ACCSLQ4AC99 568 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 C22orf39Q6P5X5 142 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 Q6ZVU0 165 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 ZC3H18Q86VM9 953 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 SYT12Q8IV01 421 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 TMEFF1Q8IYR6 380 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 ATP11CQ8NB49 1132 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 CCNYQ8ND76 341 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 ATG4AQ8WYN0 398 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 P3H4Q92791 437 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 HDAC11Q96DB2 347 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 TNKS2Q9H2K2 1166 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 PLA2G4CQ9UP65 541 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 HS3ST2Q9Y278 367 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 PIEZO2Q9H5I5 2752 aa11.73□□□□□ -0.53
CCDC90B-210ENST00000528149 LRRK1Q38SD2 2015 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 A0A087WV48 116 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 ZSCAN5CA6NGD5 496 aaPredicted RBP11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 J3QKU1 62 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 PPP1R12AO14974 1030 aaPredicted RBP11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 ATP9BO43861 1147 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 BNIP3LO60238 219 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 OPHN1O60890 802 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 FGGP02679 453 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 CD59P13987 128 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 MX2P20592 715 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 CASQ1P31415 396 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 NR2C2P49116 596 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 ATXN3P54252 364 aaPredicted RBP11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 GEMIN4P57678 1058 aaKnown RBP11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 EIF3EP60228 445 aaKnown RBP11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 PPIDQ08752 370 aaKnown RBP11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 AP1B1Q10567 949 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 PDK1Q15118 436 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 TRIP6Q15654 476 aaKnown RBP11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 TMCO4Q5TGY1 634 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 RETSATQ6NUM9 610 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 SLC23A3Q6PIS1 610 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 TRMT11Q7Z4G4 463 aaKnown RBP11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 STK40Q8N2I9 435 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 FRS2Q8WU20 508 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 ZNF419Q96HQ0 510 aaPredicted RBP11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 PBKQ96KB5 322 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 EXOC2Q96KP1 924 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 CAPZA3Q96KX2 299 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 QKIQ96PU8 341 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 TM6SF2Q9BZW4 377 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 CAAP1Q9H8G2 361 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 C10orf88Q9H8K7 445 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 SEPT10Q9P0V9 454 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 LHX3Q9UBR4 397 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 DKK4Q9UBT3 224 aa11.72□□□□□ -0.53
CCDC90B-210ENST00000528149 DOCK9Q9BZ29 2069 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 EDDM13A0A1B0GTR0 161 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 H7C0C1 242 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 KCNK1O00180 336 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 MCF2LO15068 1137 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 NPC1O15118 1278 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 PEX11BO96011 259 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 TCP1P17987 556 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 GKP32189 559 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 NNMTP40261 264 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 ATP5OP48047 213 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 CLCN6P51797 869 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 RHOAP61586 193 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 RPS14P62263 151 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 SLC10A7Q0GE19 358 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 ZBTB17Q13105 803 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 CAMK2GQ13555 558 aaPredicted RBP11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 HNRNPDQ14103 355 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 ZNF235Q14590 738 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 PRKD1Q15139 912 aaPredicted RBP11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 CYTH1Q15438 398 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 SIX1Q15475 284 aaPredicted RBP11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 DLG2Q15700 870 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 LONRF2Q1L5Z9 754 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 HNRNPA1L2Q32P51 320 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 HSF5Q4G112 596 aaPredicted RBP11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 ATXN7L2Q5T6C5 722 aaPredicted RBP11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 C9orf64Q5T6V5 341 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 PAPD7Q5XG87 772 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 SDE2Q6IQ49 451 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 LPCAT2Q7L5N7 544 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 SLC41A1Q8IVJ1 513 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 CCDC13Q8IYE1 715 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 RASGEF1CQ8N431 466 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 MINDY1Q8N5J2 469 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 CHST14Q8NCH0 376 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 CCDC26Q8TAB7 109 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 PIP4K2CQ8TBX8 421 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 KCNV2Q8TDN2 545 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 TFB1MQ8WVM0 346 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 C1orf54Q8WWF1 131 aa11.71□□□□□ -0.53
CCDC90B-210ENST00000528149 VOPP1Q96AW1 172 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms