RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 Q6ZSR6 202 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 POLNQ7Z5Q5 900 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 GLRX5Q86SX6 157 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 CPNE8Q86YQ8 564 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 NIPA2Q8N8Q9 360 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 BAHD1Q8TBE0 780 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-213ENST00000527897 CXorf40AQ8TE69 158 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 SAP25Q8TEE9 199 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 CSPG4P5Q96PW8 444 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 DNAJC7Q99615 494 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 ERVMER34-1Q9H9K5 563 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 PCDH18Q9HCL0 1135 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 ABHD10Q9NUJ1 306 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 ETNK2Q9NVF9 386 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 IPO11Q9UI26 975 aaKnown RBP15.72■□□□□ 0.11
CAPN1-213ENST00000527897 SHROOM3Q8TF72 1996 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 ANKRD36A6QL64 1941 aa15.72■□□□□ 0.11
CAPN1-213ENST00000527897 MAP1BP46821 2468 aaKnown RBP15.71■□□□□ 0.11
CAPN1-213ENST00000527897 POM121BA6NF01 834 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 A6NNZ2 444 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 TNFSF14O43557 240 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 MMP20O60882 483 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 LDOC1O95751 146 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-213ENST00000527897 H2AFZP0C0S5 128 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 TIMP2P16035 220 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 RGRP47804 291 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 IL10RBQ08334 325 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 MMRN1Q13201 1228 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 ST3GAL2Q16842 350 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 ZNF542PQ5EBM4 170 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 AFMIDQ63HM1 303 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 UNQ6494/PRO21346Q6UXR6 183 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 H2AFVQ71UI9 128 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 RAB44Q7Z6P3 723 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-213ENST00000527897 CAMK1DQ8IU85 385 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 LZTR1Q8N653 840 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 TEKT4Q8WW24 435 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 VOPP1Q96AW1 172 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 CNDP2Q96KP4 475 aaKnown RBP15.71■□□□□ 0.11
CAPN1-213ENST00000527897 CHP1Q99653 195 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 SUV39H2Q9H5I1 410 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 SPTLC3Q9NUV7 552 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 KLHL11Q9NVR0 708 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 NEUROG3Q9Y4Z2 214 aa15.71■□□□□ 0.11
CAPN1-213ENST00000527897 FPGTO14772 594 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 SPINT1O43278 529 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 MFAP3LO75121 409 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 PRKCGP05129 697 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 RXRGP48443 463 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 SCNN1BP51168 640 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 SEMG2Q02383 582 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 ZNF235Q14590 738 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 ATP13A4Q4VNC1 1196 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 KDM7AQ6ZMT4 941 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 SRLQ86TD4 932 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 ADAMTS14Q8WXS8 1223 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 BMFQ96LC9 184 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 CCDC42Q96M95 316 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 C1QTNF2Q9BXJ5 285 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 CPEB1Q9BZB8 566 aaKnown RBP15.7■□□□□ 0.1
CAPN1-213ENST00000527897 TRIM5Q9C035 493 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 ATP13A3Q9H7F0 1226 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 CAAP1Q9H8G2 361 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 DNAJC28Q9NX36 388 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 UVRAGQ9P2Y5 699 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 NENFQ9UMX5 172 aa15.7■□□□□ 0.1
CAPN1-213ENST00000527897 SSU72P8A0A1W2PR75 194 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 TTC24A2A3L6 582 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-213ENST00000527897 ENC1O14682 589 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 AREL1O15033 823 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 BUB1BO60566 1050 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-213ENST00000527897 TM7SF2O76062 418 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 CD48P09326 243 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 SERPINA4P29622 427 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 BCL2L1Q07817 233 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 DNAJC3Q13217 504 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 MESDQ14696 234 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 LBRQ14739 615 aaKnown RBP15.69■□□□□ 0.1
CAPN1-213ENST00000527897 GRM3Q14832 879 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 TMCO4Q5TGY1 634 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 KYAT3Q6YP21 454 aaKnown RBP15.69■□□□□ 0.1
CAPN1-213ENST00000527897 ABI3BPQ7Z7G0 1075 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 SLC22A18ASQ8N1D0 253 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 ATPAF2Q8N5M1 289 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 KCTD6Q8NC69 237 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 NSMCE1Q8WV22 266 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 NHEJ1Q9H9Q4 299 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-213ENST00000527897 PCDH12Q9NPG4 1184 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 TOR4AQ9NXH8 423 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 DKK3Q9UBP4 350 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 SEPT3Q9UH03 358 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 COQ6Q9Y2Z9 468 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 HS3ST3A1Q9Y663 406 aa15.69■□□□□ 0.1
CAPN1-213ENST00000527897 AKR1B15C9JRZ8 316 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-213ENST00000527897 MUSKO15146 869 aa15.68■□□□□ 0.1
CAPN1-213ENST00000527897 FFAR2O15552 330 aa15.68■□□□□ 0.1
CAPN1-213ENST00000527897 PROSCO94903 275 aa15.68■□□□□ 0.1
CAPN1-213ENST00000527897 SERPINB6P35237 376 aa15.68■□□□□ 0.1
CAPN1-213ENST00000527897 SLC10A7Q0GE19 358 aa15.68■□□□□ 0.1
CAPN1-213ENST00000527897 ELP6Q0PNE2 266 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms