RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 SMC2O95347 1197 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 POP4O95707 220 aaKnown RBP12.47□□□□□ -0.41
SRPRA-202ENST00000527817 CELA2BP08218 269 aaPredicted RBP12.47□□□□□ -0.41
SRPRA-202ENST00000527817 CTSEP14091 401 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 PNLIPP16233 465 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 WT1P19544 449 aaPredicted RBP12.47□□□□□ -0.41
SRPRA-202ENST00000527817 GNA12Q03113 381 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 SERINC3Q13530 473 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 STIM1Q13586 685 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 SMYD5Q6GMV2 418 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 FOXR2Q6PJQ5 311 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 OGFOD3Q6PK18 319 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 CLEC18BQ6UXF7 455 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 TTC7BQ86TV6 843 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 VASH2Q86V25 355 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 ZFAND4Q86XD8 727 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 GKN2Q86XP6 184 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 TRIM59Q8IWR1 403 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 KYQ8NBH2 561 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 TP53I13Q8NBR0 393 aaPredicted RBP12.47□□□□□ -0.41
SRPRA-202ENST00000527817 CLEC18CQ8NCF0 446 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 C1orf131Q8NDD1 294 aaKnown RBP12.47□□□□□ -0.41
SRPRA-202ENST00000527817 GPR156Q8NFN8 814 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 PCDH19Q8TAB3 1148 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 HTR3CQ8WXA8 447 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 USP7Q93009 1102 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 VOPP1Q96AW1 172 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 FAM81BQ96LP2 452 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 HAPLN3Q96S86 360 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 MBNL1Q9NR56 388 aaKnown RBP12.47□□□□□ -0.41
SRPRA-202ENST00000527817 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.47□□□□□ -0.41
SRPRA-202ENST00000527817 SIRPGQ9P1W8 387 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 ITM2BQ9Y287 266 aa12.47□□□□□ -0.41
SRPRA-202ENST00000527817 FCF1Q9Y324 198 aaKnown RBP12.47□□□□□ -0.41
SRPRA-202ENST00000527817 BECN2A8MW95 431 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.46□□□□□ -0.41
SRPRA-202ENST00000527817 MMP20O60882 483 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 SRGAP2O75044 1071 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 RASGRP1O95267 797 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 GSRP00390 522 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 ERBB2P04626 1255 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 TFE3P19532 575 aaPredicted RBP12.46□□□□□ -0.41
SRPRA-202ENST00000527817 ITIH1P19827 911 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 CR2P20023 1033 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 GKP32189 559 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 ETV5P41161 510 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 PPP1R2P41236 205 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 SNRPD1P62314 119 aaKnown RBP12.46□□□□□ -0.41
SRPRA-202ENST00000527817 CYP4F2P78329 520 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 DEUP1Q05D60 604 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 MYLK3Q32MK0 819 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 ZDHHC17Q8IUH5 632 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 HID1Q8IV36 788 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 ZNF564Q8TBZ8 553 aaPredicted RBP12.46□□□□□ -0.41
SRPRA-202ENST00000527817 SMARCE1Q969G3 411 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 TSACCQ96A04 125 aaPredicted RBP12.46□□□□□ -0.41
SRPRA-202ENST00000527817 KLHL32Q96NJ5 620 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 CMKLR1Q99788 373 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 SLC12A9Q9BXP2 914 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 OSBPL1AQ9BXW6 950 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 TM6SF2Q9BZW4 377 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 ZYG11BQ9C0D3 744 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 TUBD1Q9UJT1 453 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 STAP1Q9ULZ2 295 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 ZDHHC9Q9Y397 364 aa12.46□□□□□ -0.41
SRPRA-202ENST00000527817 C9orf172C9J069 976 aa12.45□□□□□ -0.42
SRPRA-202ENST00000527817 KRIT1O00522 736 aa12.45□□□□□ -0.42
SRPRA-202ENST00000527817 GNA14O95837 355 aa12.45□□□□□ -0.42
SRPRA-202ENST00000527817 GLB1P16278 677 aa12.45□□□□□ -0.42
SRPRA-202ENST00000527817 MARSP56192 900 aaKnown RBP12.45□□□□□ -0.42
SRPRA-202ENST00000527817 GEMIN4P57678 1058 aaKnown RBP12.45□□□□□ -0.42
SRPRA-202ENST00000527817 FOXK1P85037 733 aa12.45□□□□□ -0.42
SRPRA-202ENST00000527817 ALG11Q2TAA5 492 aa12.45□□□□□ -0.42
SRPRA-202ENST00000527817 KLHL40Q2TBA0 621 aa12.45□□□□□ -0.42
SRPRA-202ENST00000527817 SLC25A52Q3SY17 297 aa12.45□□□□□ -0.42
SRPRA-202ENST00000527817 TTI2Q6NXR4 508 aa12.45□□□□□ -0.42
SRPRA-202ENST00000527817 CCNJLQ8IV13 435 aa12.45□□□□□ -0.42
SRPRA-202ENST00000527817 HSCBQ8IWL3 235 aa12.45□□□□□ -0.42
SRPRA-202ENST00000527817 FMR1NBQ8N0W7 255 aaPredicted RBP12.45□□□□□ -0.42
SRPRA-202ENST00000527817 RYBPQ8N488 228 aaPredicted RBP12.45□□□□□ -0.42
SRPRA-202ENST00000527817 OR2AP1Q8NGE2 309 aa12.45□□□□□ -0.42
SRPRA-202ENST00000527817 CXorf40AQ8TE69 158 aa12.45□□□□□ -0.42
SRPRA-202ENST00000527817 EPAS1Q99814 870 aa12.45□□□□□ -0.42
SRPRA-202ENST00000527817 RETREG1Q9H6L5 497 aa12.45□□□□□ -0.42
SRPRA-202ENST00000527817 TMPRSS4Q9NRS4 437 aa12.45□□□□□ -0.42
SRPRA-202ENST00000527817 FOXJ2Q9P0K8 574 aa12.45□□□□□ -0.42
SRPRA-202ENST00000527817 PPARGC1AQ9UBK2 798 aaKnown RBP12.45□□□□□ -0.42
SRPRA-202ENST00000527817 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.45□□□□□ -0.42
SRPRA-202ENST00000527817 ACTL7AQ9Y615 435 aa12.45□□□□□ -0.42
SRPRA-202ENST00000527817 SPTBN1Q01082 2364 aaKnown RBP12.44□□□□□ -0.42
SRPRA-202ENST00000527817 TNFP01375 233 aa12.44□□□□□ -0.42
SRPRA-202ENST00000527817 UGT2B4P06133 528 aa12.44□□□□□ -0.42
SRPRA-202ENST00000527817 TIMP2P16035 220 aa12.44□□□□□ -0.42
SRPRA-202ENST00000527817 CD44P16070 742 aaKnown RBP12.44□□□□□ -0.42
SRPRA-202ENST00000527817 HTR1BP28222 390 aa12.44□□□□□ -0.42
SRPRA-202ENST00000527817 ETFBP38117 255 aa12.44□□□□□ -0.42
SRPRA-202ENST00000527817 SULT1E1P49888 294 aa12.44□□□□□ -0.42
SRPRA-202ENST00000527817 MAPK10P53779 464 aa12.44□□□□□ -0.42
SRPRA-202ENST00000527817 RNASE9P60153 205 aaKnown RBP12.44□□□□□ -0.42
SRPRA-202ENST00000527817 SRP54P61011 504 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms