RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 UBE2OQ9C0C9 1292 aaKnown RBP11.77□□□□□ -0.52
LINC01001-201ENST00000526704 SIK2Q9H0K1 926 aa11.77□□□□□ -0.52
LINC01001-201ENST00000526704 TNFRSF12AQ9NP84 129 aa11.77□□□□□ -0.52
LINC01001-201ENST00000526704 MIOSQ9NXC5 875 aa11.77□□□□□ -0.52
LINC01001-201ENST00000526704 ARHGEF38Q9NXL2 777 aa11.77□□□□□ -0.52
LINC01001-201ENST00000526704 GTSE1Q9NYZ3 720 aa11.77□□□□□ -0.52
LINC01001-201ENST00000526704 NCKIPSDQ9NZQ3 722 aa11.77□□□□□ -0.52
LINC01001-201ENST00000526704 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.77□□□□□ -0.52
LINC01001-201ENST00000526704 TRIM38O00635 465 aa11.77□□□□□ -0.53
LINC01001-201ENST00000526704 CDKL1Q00532 357 aa11.77□□□□□ -0.53
LINC01001-201ENST00000526704 EIF4EBP2Q13542 120 aaPredicted RBP11.77□□□□□ -0.53
LINC01001-201ENST00000526704 PTK2BQ14289 1009 aa11.77□□□□□ -0.53
LINC01001-201ENST00000526704 TECRLQ5HYJ1 363 aa11.77□□□□□ -0.53
LINC01001-201ENST00000526704 KIAA0930Q6ICG6 404 aaPredicted RBP11.77□□□□□ -0.53
LINC01001-201ENST00000526704 POTEHQ6S545 545 aa11.77□□□□□ -0.53
LINC01001-201ENST00000526704 CHSY3Q70JA7 882 aa11.77□□□□□ -0.53
LINC01001-201ENST00000526704 SPATA24Q86W54 205 aa11.77□□□□□ -0.53
LINC01001-201ENST00000526704 METTL25Q8N6Q8 603 aa11.77□□□□□ -0.53
LINC01001-201ENST00000526704 PTCD2Q8WV60 388 aaKnown RBP11.77□□□□□ -0.53
LINC01001-201ENST00000526704 CNBD2Q96M20 576 aa11.77□□□□□ -0.53
LINC01001-201ENST00000526704 GAD1Q99259 594 aa11.77□□□□□ -0.53
LINC01001-201ENST00000526704 PAAF1Q9BRP4 392 aa11.77□□□□□ -0.53
LINC01001-201ENST00000526704 SLC39A8Q9C0K1 460 aa11.77□□□□□ -0.53
LINC01001-201ENST00000526704 TRPV6Q9H1D0 765 aa11.77□□□□□ -0.53
LINC01001-201ENST00000526704 NDFIP2Q9NV92 336 aa11.77□□□□□ -0.53
LINC01001-201ENST00000526704 SLC38A7Q9NVC3 462 aa11.77□□□□□ -0.53
LINC01001-201ENST00000526704 PCDHGA7Q9Y5G6 932 aa11.77□□□□□ -0.53
LINC01001-201ENST00000526704 MRPL42Q9Y6G3 142 aaKnown RBP11.77□□□□□ -0.53
LINC01001-201ENST00000526704 RNASEH2AO75792 299 aaKnown RBP11.76□□□□□ -0.53
LINC01001-201ENST00000526704 TFAP2AP05549 437 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 MYL3P08590 195 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 CPB1P15086 417 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 TCN1P20061 433 aaPredicted RBP11.76□□□□□ -0.53
LINC01001-201ENST00000526704 KCNA5P22460 613 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 ATP5F1P24539 256 aaPredicted RBP11.76□□□□□ -0.53
LINC01001-201ENST00000526704 HOXC13P31276 330 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 GEMP55040 296 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 C6orf52Q5T4I8 152 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 MANEALQ5VSG8 457 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 USP50Q70EL3 339 aaPredicted RBP11.76□□□□□ -0.53
LINC01001-201ENST00000526704 AHI1Q8N157 1196 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 CEP70Q8NHQ1 597 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 SPPL2BQ8TCT7 592 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 LPPQ93052 612 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 MRGPRX2Q96LB1 330 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 OLFM1Q99784 485 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 ZCWPW1Q9H0M4 648 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 FIS1Q9Y3D6 152 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 GBF1Q92538 1859 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 MYOCOSA0A1B0GUC4 107 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 MATN3O15232 486 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 PMPCBO75439 489 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 BDNFP23560 247 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 PSME3P61289 254 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 BEX3Q00994 111 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 PFKPQ01813 784 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 POU4F1Q01851 419 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 LAMB3Q13751 1172 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 SEPT6Q14141 434 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 CSHL1Q14406 222 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 ZNF789Q5FWF6 425 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 NOMO2Q5JPE7 1267 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 FAM219BQ5XKK7 198 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 RPS27LQ71UM5 84 aaKnown RBP11.76□□□□□ -0.53
LINC01001-201ENST00000526704 ASB9Q96DX5 294 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 NDNQ99608 321 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 ATXN3LQ9H3M9 355 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 ZNF696Q9H7X3 374 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 CYP4F12Q9HCS2 524 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 ENTPD7Q9NQZ7 604 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 UTP6Q9NYH9 597 aaKnown RBP11.76□□□□□ -0.53
LINC01001-201ENST00000526704 NDUFA13Q9P0J0 144 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 APPL1Q9UKG1 709 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 FBXO5Q9UKT4 447 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 LZTS1Q9Y250 596 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 SH3BP1Q9Y3L3 701 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 TLL2Q9Y6L7 1015 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 ANKRD36A6QL64 1941 aa11.76□□□□□ -0.53
LINC01001-201ENST00000526704 C17orf102A2RUQ5 167 aa11.75□□□□□ -0.53
LINC01001-201ENST00000526704 CASTOR2A6NHX0 329 aa11.75□□□□□ -0.53
LINC01001-201ENST00000526704 A8MT66 165 aa11.75□□□□□ -0.53
LINC01001-201ENST00000526704 VILLO15195 856 aa11.75□□□□□ -0.53
LINC01001-201ENST00000526704 IRAK2O43187 625 aa11.75□□□□□ -0.53
LINC01001-201ENST00000526704 PAGE1O75459 146 aa11.75□□□□□ -0.53
LINC01001-201ENST00000526704 THP07101 528 aa11.75□□□□□ -0.53
LINC01001-201ENST00000526704 CYP2C18P33260 490 aa11.75□□□□□ -0.53
LINC01001-201ENST00000526704 RPL5P46777 297 aaKnown RBP11.75□□□□□ -0.53
LINC01001-201ENST00000526704 PSMD8P48556 350 aa11.75□□□□□ -0.53
LINC01001-201ENST00000526704 KPNA2P52292 529 aaKnown RBP11.75□□□□□ -0.53
LINC01001-201ENST00000526704 C1QTNF8P60827 252 aa11.75□□□□□ -0.53
LINC01001-201ENST00000526704 TBC1D25Q3MII6 688 aa11.75□□□□□ -0.53
LINC01001-201ENST00000526704 TIGD5Q53EQ6 642 aa11.75□□□□□ -0.53
LINC01001-201ENST00000526704 IL23RQ5VWK5 629 aa11.75□□□□□ -0.53
LINC01001-201ENST00000526704 ARMC3Q5W041 872 aa11.75□□□□□ -0.53
LINC01001-201ENST00000526704 BTBD8Q5XKL5 378 aa11.75□□□□□ -0.53
LINC01001-201ENST00000526704 GALNT4Q8N4A0 578 aa11.75□□□□□ -0.53
LINC01001-201ENST00000526704 PCDH20Q8N6Y1 951 aaKnown RBP11.75□□□□□ -0.53
LINC01001-201ENST00000526704 ZC3H15Q8WU90 426 aaKnown RBP11.75□□□□□ -0.53
LINC01001-201ENST00000526704 FSD1LQ9BXM9 530 aa11.75□□□□□ -0.53
LINC01001-201ENST00000526704 MRPS26Q9BYN8 205 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms