RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 DR1Q01658 176 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 BCL2L1Q07817 233 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 CST6Q15828 149 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 LRRC73Q5JTD7 316 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 GDPD4Q6W3E5 623 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 BMP8AQ7Z5Y6 402 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 DSG4Q86SJ6 1040 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 CTAGE6Q86UF2 777 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 JAMLQ86YT9 394 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 CTAGE4Q8IX94 777 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 PLPP6Q8IY26 295 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 CEP112Q8N8E3 955 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 DTWD2Q8NBA8 298 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 NOA1Q8NC60 698 aaKnown RBP13.86□□□□□ -0.19
CD44-224ENST00000526669 MNS1Q8NEH6 495 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 MDGA1Q8NFP4 955 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 IPMKQ8NFU5 416 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 SIPA1Q96FS4 1042 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 FCRL5Q96RD9 977 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 MLPHQ9BV36 600 aaPredicted RBP13.86□□□□□ -0.19
CD44-224ENST00000526669 ATP13A3Q9H7F0 1226 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 ETNK1Q9HBU6 452 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 PCDH9Q9HC56 1237 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 PAK5Q9P286 719 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 CHKBQ9Y259 395 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 RAI2Q9Y5P3 530 aa13.86□□□□□ -0.19
CD44-224ENST00000526669 TNRC6BQ9UPQ9 1833 aaKnown RBP13.85□□□□□ -0.19
CD44-224ENST00000526669 ZNF106Q9H2Y7 1883 aaKnown RBP13.85□□□□□ -0.19
CD44-224ENST00000526669 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.85□□□□□ -0.19
CD44-224ENST00000526669 A0A1W2PP55 124 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 GAS8O95995 478 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 DNTTP04053 509 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 PRKCGP05129 697 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 SERPINA4P29622 427 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 AVPR2P30518 371 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 SLC8A1P32418 973 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 GEMP55040 296 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 BASP1P80723 227 aaKnown RBP13.85□□□□□ -0.19
CD44-224ENST00000526669 DMWDQ09019 674 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 GPS1Q13098 491 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 PTK6Q13882 451 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 SPARCL1Q14515 664 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 PRPSAP1Q14558 356 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 CFAP58Q5T655 872 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 KDELC1Q6UW63 502 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 PARS2Q7L3T8 475 aaKnown RBP13.85□□□□□ -0.19
CD44-224ENST00000526669 ZSWIM9Q86XI8 627 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 GANCQ8TET4 914 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 PRCCQ92733 491 aaPredicted RBP13.85□□□□□ -0.19
CD44-224ENST00000526669 MRGPRX1Q96LB2 322 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 RUNDC3BQ96NL0 473 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 IER2Q9BTL4 223 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 FICDQ9BVA6 458 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 CPEB1Q9BZB8 566 aaKnown RBP13.85□□□□□ -0.19
CD44-224ENST00000526669 TRIM31Q9BZY9 425 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 SUV39H2Q9H5I1 410 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 FBRSQ9HAH7 460 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 RRAGDQ9NQL2 400 aaPredicted RBP13.85□□□□□ -0.19
CD44-224ENST00000526669 RAB6BQ9NRW1 208 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 SERGEFQ9UGK8 458 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 ASIC3Q9UHC3 531 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 FAM153AQ9UHL3 310 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 PPM1HQ9ULR3 514 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 NEU2Q9Y3R4 380 aa13.85□□□□□ -0.19
CD44-224ENST00000526669 PLXNB3Q9ULL4 1909 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 K7ESF4 209 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 LAMTOR5O43504 91 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 ALDH1A2O94788 518 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 APBB3O95704 486 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 ADH1BP00325 375 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 CPP00450 1065 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 PDHA1P08559 390 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 ACADMP11310 421 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 FDFT1P37268 417 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 MAPK8P45983 427 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 LMAN1P49257 510 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 WNT3AP56704 352 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 SEMG2Q02383 582 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 CNTN1Q12860 1018 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 DHX34Q14147 1143 aaKnown RBP13.84□□□□□ -0.19
CD44-224ENST00000526669 GALNT3Q14435 633 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 PARP6Q2NL67 630 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 RALGPS1Q5JS13 557 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 FAM46CQ5VWP2 391 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 FAM124AQ86V42 546 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 HDDC3Q8N4P3 179 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 AADATQ8N5Z0 425 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 TMIEQ8NEW7 156 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 LPCAT1Q8NF37 534 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 MRGPRX2Q96LB1 330 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 SMIM14Q96QK8 99 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 TUBGCP5Q96RT8 1024 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 HINFPQ9BQA5 517 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 APOL2Q9BQE5 337 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 TDRD1Q9BXT4 1180 aaKnown RBP13.84□□□□□ -0.19
CD44-224ENST00000526669 OSBPL1AQ9BXW6 950 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 PABPC3Q9H361 631 aaKnown RBP13.84□□□□□ -0.19
CD44-224ENST00000526669 L2HGDHQ9H9P8 463 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 DYRK4Q9NR20 520 aa13.84□□□□□ -0.19
CD44-224ENST00000526669 PCDHB9Q9Y5E1 797 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms