RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 KIFAP3Q92845 792 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 PPP2R3CQ969Q6 453 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 SPSB4Q96A44 273 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 TMEM143Q96AN5 459 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 IFT74Q96LB3 600 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 GSDMAQ96QA5 445 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 NTPCRQ9BSD7 190 aaKnown RBP4.81□□□□□ -1.64
USP48-211ENST00000526044 ANP32EQ9BTT0 268 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 TRIM9Q9C026 710 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 INO80BQ9C086 356 aaPredicted RBP4.81□□□□□ -1.64
USP48-211ENST00000526044 KLK15Q9H2R5 256 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 PRDM13Q9H4Q3 707 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 C11orf49Q9H6J7 331 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 DHX33Q9H6R0 707 aaKnown RBP4.81□□□□□ -1.64
USP48-211ENST00000526044 CXorf36Q9H7Y0 433 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 C17orf75Q9HAS0 396 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 GLOD4Q9HC38 313 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 PTPRHQ9HD43 1115 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 RMND1Q9NWS8 449 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 LARSQ9P2J5 1176 aaKnown RBP4.81□□□□□ -1.64
USP48-211ENST00000526044 SUCLA2Q9P2R7 463 aaPredicted RBP4.81□□□□□ -1.64
USP48-211ENST00000526044 TUBE1Q9UJT0 475 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 ODF2LQ9ULJ1 636 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 SH2B3Q9UQQ2 575 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 COX11Q9Y6N1 276 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 ARID2Q68CP9 1835 aa4.81□□□□□ -1.64
USP48-211ENST00000526044 PCNTO95613 3336 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 MROH7Q68CQ1 1323 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 A1L4Q6 167 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 MBLAC1A4D2B0 266 aaPredicted RBP4.8□□□□□ -1.64
USP48-211ENST00000526044 CCDC169A6NNP5 214 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 RSPH10B2B2RC85 870 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 KLRC4O43908 158 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 TBCAO75347 108 aaKnown RBP4.8□□□□□ -1.64
USP48-211ENST00000526044 RASSF9O75901 435 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 C22orf31O95567 290 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 IGLV2-14P01704 120 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 FAM163BP0C2L3 166 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 RSPH10BP0C881 870 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 NDUFB7P17568 137 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 GLRA2P23416 452 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 CCT8P50990 548 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 PRKAG1P54619 331 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 POU5F1BQ06416 359 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 TFDP1Q14186 410 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 KCNB1Q14721 858 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 EMC2Q15006 297 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 INSCQ1MX18 579 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 ZNF658Q5TYW1 1059 aaPredicted RBP4.8□□□□□ -1.64
USP48-211ENST00000526044 ZNF720Q7Z2F6 126 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 RD3Q7Z3Z2 195 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 RHPN2Q8IUC4 686 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 DAW1Q8N136 415 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 LRRC71Q8N4P6 559 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 TRIML1Q8N9V2 468 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 SPATA20Q8TB22 786 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 BPIFB1Q8TDL5 484 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 PSPC1Q8WXF1 523 aaKnown RBP4.8□□□□□ -1.64
USP48-211ENST00000526044 PPM1EQ8WY54 764 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 ZBTB10Q96DT7 871 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 PPP1R9BQ96SB3 815 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 MAP7D2Q96T17 732 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 REEP2Q9BRK0 252 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 TRPV6Q9H1D0 765 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 POLR3FQ9H1D9 316 aaPredicted RBP4.8□□□□□ -1.64
USP48-211ENST00000526044 MRPL44Q9H9J2 332 aaKnown RBP4.8□□□□□ -1.64
USP48-211ENST00000526044 PARVGQ9HBI0 331 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 CPNE5Q9HCH3 593 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 XPNPEP1Q9NQW7 623 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 TRMT13Q9NUP7 481 aaKnown RBP4.8□□□□□ -1.64
USP48-211ENST00000526044 EXOC1Q9NV70 894 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 ASB6Q9NWX5 421 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 TBC1D7Q9P0N9 293 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 SEL1LQ9UBV2 794 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 MAN1B1Q9UKM7 699 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 PCDHGB6Q9Y5F9 930 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 SCN10AQ9Y5Y9 1956 aa4.8□□□□□ -1.64
USP48-211ENST00000526044 LOC102723971A0A1B0GUV8 181 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 FRMD3A2A2Y4 597 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 LRRIQ4A6NIV6 560 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 H0YCG3 227 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 K7ERI5 159 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 M0QZ92 97 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 SLC16A4O15374 487 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 PROP1O75360 226 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 CD4P01730 458 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 VTNP04004 478 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 IL6RP08887 468 aaPredicted RBP4.79□□□□□ -1.64
USP48-211ENST00000526044 EBLN1P0CF75 366 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 GPD1P21695 349 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 SCP2P22307 547 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 NMT1P30419 496 aaKnown RBP4.79□□□□□ -1.64
USP48-211ENST00000526044 HOXC8P31273 242 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 ABCD1P33897 745 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 LIPAP38571 399 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 THPOP40225 353 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 NAMPTP43490 491 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 CLCN3P51790 818 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 ZNF131P52739 623 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 EFNA5P52803 228 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms