RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 ACADMP11310 421 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 NFKB1P19838 968 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 PSMB4P28070 264 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 GKP32189 559 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 HSPA9P38646 679 aaKnown RBP12.07□□□□□ -0.48
PVT1-215ENST00000522963 VPS41P49754 854 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 SNRPD1P62314 119 aaKnown RBP12.07□□□□□ -0.48
PVT1-215ENST00000522963 NSUN2Q08J23 767 aaKnown RBP eCLIP12.07□□□□□ -0.48
PVT1-215ENST00000522963 PTK6Q13882 451 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 IHHQ14623 411 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 ELF2Q15723 593 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 CARD16Q5EG05 197 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 C9orf64Q5T6V5 341 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 DPY19L3Q6ZPD9 716 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 ARHGEF18Q6ZSZ5 1173 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 ARMCX6Q7L4S7 300 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 FAM124AQ86V42 546 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 PLPP6Q8IY26 295 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 TAB3Q8N5C8 712 aaPredicted RBP12.07□□□□□ -0.48
PVT1-215ENST00000522963 CHST14Q8NCH0 376 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 OR2AP1Q8NGE2 309 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 OR2A12Q8NGT7 310 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 OR6K2Q8NGY2 324 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 OR2T3Q8NH03 318 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 ARRDC2Q8TBH0 407 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 GANCQ8TET4 914 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 PRCCQ92733 491 aaPredicted RBP12.07□□□□□ -0.48
PVT1-215ENST00000522963 VOPP1Q96AW1 172 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 GDAP1L1Q96MZ0 367 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 NUDCD1Q96RS6 583 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 SEMA3CQ99985 751 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 GORASP1Q9BQQ3 440 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 TRIM51Q9BSJ1 452 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 POLR1EQ9GZS1 481 aaKnown RBP12.07□□□□□ -0.48
PVT1-215ENST00000522963 MKRN2Q9H000 416 aaKnown RBP12.07□□□□□ -0.48
PVT1-215ENST00000522963 SLC25A51Q9H1U9 297 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 GBA3Q9H227 469 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 CD93Q9NPY3 652 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 PRSS16Q9NQE7 514 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 PAK5Q9P286 719 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 RSPH14Q9UHP6 348 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 MUC22E2RYF6 1773 aaPredicted RBP12.07□□□□□ -0.48
PVT1-215ENST00000522963 NUMA1Q14980 2115 aa12.07□□□□□ -0.48
PVT1-215ENST00000522963 PIEZO1Q92508 2521 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 TARSL2A2RTX5 802 aaKnown RBP12.06□□□□□ -0.48
PVT1-215ENST00000522963 FAM187AA6NFU0 413 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 RHOBTB1O94844 696 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 IGSF6O95976 241 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 MMP2P08253 660 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 ACTN2P35609 894 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 P2RY2P41231 377 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 CSNK1DP48730 415 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 DHPSP49366 369 aaPredicted RBP12.06□□□□□ -0.48
PVT1-215ENST00000522963 SCNN1BP51168 640 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 CCNHP51946 323 aaPredicted RBP12.06□□□□□ -0.48
PVT1-215ENST00000522963 SKOR1P84550 965 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 CAMK2GQ13555 558 aaPredicted RBP12.06□□□□□ -0.48
PVT1-215ENST00000522963 PPP1R7Q15435 360 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 PARP6Q2NL67 630 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 MYLK3Q32MK0 819 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 MAP7D1Q3KQU3 841 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 PLK5Q496M5 336 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 FAXCQ5TGI0 409 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 ITPRIPL1Q6GPH6 555 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 LAIR1Q6GTX8 287 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 NCEH1Q6PIU2 408 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 SYDE1Q6ZW31 735 aaPredicted RBP12.06□□□□□ -0.48
PVT1-215ENST00000522963 MAATS1Q7Z4T9 603 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 SRLQ86TD4 932 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 PRPF39Q86UA1 669 aaKnown RBP12.06□□□□□ -0.48
PVT1-215ENST00000522963 TMEFF1Q8IYR6 380 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 STK40Q8N2I9 435 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 RYBPQ8N488 228 aaPredicted RBP12.06□□□□□ -0.48
PVT1-215ENST00000522963 SPATA22Q8NHS9 363 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 RUBCNQ92622 972 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 TADA1Q96BN2 335 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 IMP4Q96G21 291 aaKnown RBP12.06□□□□□ -0.48
PVT1-215ENST00000522963 OXNAD1Q96HP4 312 aaPredicted RBP12.06□□□□□ -0.48
PVT1-215ENST00000522963 FCRL5Q96RD9 977 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 RBM15Q96T37 977 aaKnown RBP eCLIP12.06□□□□□ -0.483e-8■■■■□ 20.1
PVT1-215ENST00000522963 LRRC1Q9BTT6 524 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 DUSP15Q9H1R2 295 aaPredicted RBP12.06□□□□□ -0.48
PVT1-215ENST00000522963 NOD2Q9HC29 1040 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 CD248Q9HCU0 757 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 SCUBE2Q9NQ36 999 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 HAUS2Q9NVX0 235 aa12.06□□□□□ -0.48
PVT1-215ENST00000522963 HECAQ9UBI9 543 aaPredicted RBP12.06□□□□□ -0.48
PVT1-215ENST00000522963 EVLQ9UI08 416 aaPredicted RBP12.06□□□□□ -0.48
PVT1-215ENST00000522963 OTOGLQ3ZCN5 2332 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.05□□□□□ -0.48
PVT1-215ENST00000522963 RIOK3O14730 519 aaKnown RBP12.05□□□□□ -0.48
PVT1-215ENST00000522963 RNASEH1O60930 286 aaKnown RBP12.05□□□□□ -0.48
PVT1-215ENST00000522963 NDUFS2O75306 463 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 ZNF217O75362 1048 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 SLU7O95391 586 aaKnown RBP12.05□□□□□ -0.48
PVT1-215ENST00000522963 DNTTP04053 509 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 CES1P23141 567 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 CD86P42081 329 aa12.05□□□□□ -0.48
PVT1-215ENST00000522963 RECQLP46063 649 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms