RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 CHST14Q8NCH0 376 aa15.22■□□□□ 0.03
SREK1-209ENST00000520953 FBXO36Q8NEA4 188 aa15.22■□□□□ 0.03
SREK1-209ENST00000520953 SIGLEC10Q96LC7 697 aa15.22■□□□□ 0.03
SREK1-209ENST00000520953 ACOX2Q99424 681 aa15.22■□□□□ 0.03
SREK1-209ENST00000520953 PABPC3Q9H361 631 aaKnown RBP15.22■□□□□ 0.03
SREK1-209ENST00000520953 CENPHQ9H3R5 247 aa15.22■□□□□ 0.03
SREK1-209ENST00000520953 LRRC40Q9H9A6 602 aa15.22■□□□□ 0.03
SREK1-209ENST00000520953 CASS4Q9NQ75 786 aa15.22■□□□□ 0.03
SREK1-209ENST00000520953 SYBUQ9NX95 663 aa15.22■□□□□ 0.03
SREK1-209ENST00000520953 SLC25A13Q9UJS0 675 aa15.22■□□□□ 0.03
SREK1-209ENST00000520953 AAR2Q9Y312 384 aaKnown RBP15.22■□□□□ 0.03
SREK1-209ENST00000520953 MUC22E2RYF6 1773 aaPredicted RBP15.21■□□□□ 0.03
SREK1-209ENST00000520953 A0A0C4DFX4 3053 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 CCDC78A2IDD5 438 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 TBC1D3BA6NDS4 549 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 ANXA9O76027 345 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 KAT7O95251 611 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 GALK1P51570 392 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 GEMP55040 296 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 DMC1Q14565 340 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 CCDC38Q502W7 563 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 TTC19Q6DKK2 380 aaPredicted RBP15.21■□□□□ 0.03
SREK1-209ENST00000520953 LRRC8BQ6P9F7 803 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 NCEH1Q6PIU2 408 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 PPP1R21Q6ZMI0 780 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 CENPUQ71F23 418 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 PDIK1LQ8N165 341 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 BBS5Q8N3I7 341 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 RYBPQ8N488 228 aaPredicted RBP15.21■□□□□ 0.03
SREK1-209ENST00000520953 FRS2Q8WU20 508 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 NUDCD1Q96RS6 583 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 FAM129AQ9BZQ8 928 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 CHKBQ9Y259 395 aa15.21■□□□□ 0.03
SREK1-209ENST00000520953 TCF20Q9UGU0 1960 aaKnown RBP15.21■□□□□ 0.03
SREK1-209ENST00000520953 A0A0U1RQS6 177 aa15.21■□□□□ 0.02
SREK1-209ENST00000520953 DLDP09622 509 aaKnown RBP15.21■□□□□ 0.02
SREK1-209ENST00000520953 NUDT17P0C025 328 aa15.21■□□□□ 0.02
SREK1-209ENST00000520953 ATXN1LP0C7T5 689 aaKnown RBP15.21■□□□□ 0.02
SREK1-209ENST00000520953 PIRTP0C851 137 aa15.21■□□□□ 0.02
SREK1-209ENST00000520953 GNGT1P63211 74 aa15.21■□□□□ 0.02
SREK1-209ENST00000520953 MPP3Q13368 585 aa15.21■□□□□ 0.02
SREK1-209ENST00000520953 CES3Q6UWW8 571 aa15.21■□□□□ 0.02
SREK1-209ENST00000520953 RANBP10Q6VN20 620 aa15.21■□□□□ 0.02
SREK1-209ENST00000520953 DPY19L3Q6ZPD9 716 aa15.21■□□□□ 0.02
SREK1-209ENST00000520953 SRLQ86TD4 932 aa15.21■□□□□ 0.02
SREK1-209ENST00000520953 CAMK1DQ8IU85 385 aa15.21■□□□□ 0.02
SREK1-209ENST00000520953 ZNF557Q8N988 423 aaPredicted RBP15.21■□□□□ 0.02
SREK1-209ENST00000520953 DNAAF3Q8N9W5 541 aa15.21■□□□□ 0.02
SREK1-209ENST00000520953 CSGALNACT1Q8TDX6 532 aa15.21■□□□□ 0.02
SREK1-209ENST00000520953 FSD1LQ9BXM9 530 aa15.21■□□□□ 0.02
SREK1-209ENST00000520953 TEX264Q9Y6I9 313 aa15.21■□□□□ 0.02
SREK1-209ENST00000520953 ALOX15BO15296 676 aa15.2■□□□□ 0.02
SREK1-209ENST00000520953 PRLP01236 227 aa15.2■□□□□ 0.02
SREK1-209ENST00000520953 SHBGP04278 402 aa15.2■□□□□ 0.02
SREK1-209ENST00000520953 GPX6P59796 221 aa15.2■□□□□ 0.02
SREK1-209ENST00000520953 SIRPB2Q5JXA9 342 aa15.2■□□□□ 0.02
SREK1-209ENST00000520953 FOXR1Q6PIV2 292 aa15.2■□□□□ 0.02
SREK1-209ENST00000520953 PDCD6IPQ8WUM4 868 aaKnown RBP15.2■□□□□ 0.02
SREK1-209ENST00000520953 TRIB3Q96RU7 358 aa15.2■□□□□ 0.02
SREK1-209ENST00000520953 RAI2Q9Y5P3 530 aa15.2■□□□□ 0.02
SREK1-209ENST00000520953 SPECC1L-ADORA2AF8WAN1 911 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 RIPK2O43353 540 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 ATP9BO43861 1147 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 SERPINF2P08697 491 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 SSTR1P30872 391 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 CTHP32929 405 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 GEMIN4P57678 1058 aaKnown RBP15.19■□□□□ 0.02
SREK1-209ENST00000520953 CDK16Q00536 496 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 SULT2A1Q06520 285 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 SLC20A2Q08357 652 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 KRT71Q3SY84 523 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 EGFLAMQ63HQ2 1017 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 OR2AP1Q8NGE2 309 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 OR2A12Q8NGT7 310 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 WFIKKN2Q8TEU8 576 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 CFAP36Q96G28 342 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 TDRD1Q9BXT4 1180 aaKnown RBP15.19■□□□□ 0.02
SREK1-209ENST00000520953 XAB2Q9HCS7 855 aaKnown RBP15.19■□□□□ 0.02
SREK1-209ENST00000520953 HECAQ9UBI9 543 aaPredicted RBP15.19■□□□□ 0.02
SREK1-209ENST00000520953 MAD1L1Q9Y6D9 718 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 PIAS3Q9Y6X2 628 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 SHISA7A6NL88 538 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 ERI2A8K979 691 aaKnown RBP15.19■□□□□ 0.02
SREK1-209ENST00000520953 EIF3HO15372 352 aaKnown RBP eCLIP15.19■□□□□ 0.021e-6■□□□□ 10.8
SREK1-209ENST00000520953 WASP42768 502 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 CCNHP51946 323 aaPredicted RBP15.19■□□□□ 0.02
SREK1-209ENST00000520953 SEC13P55735 322 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 EIF3BP55884 814 aaKnown RBP15.19■□□□□ 0.02
SREK1-209ENST00000520953 NSUN2Q08J23 767 aaKnown RBP eCLIP15.19■□□□□ 0.02
SREK1-209ENST00000520953 IFFO1Q0D2I5 559 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 SLC29A2Q14542 456 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 ZNF234Q14588 700 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 POU6F1Q14863 301 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 SLMAPQ14BN4 828 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 SLC1A5Q15758 541 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 AGBL2Q5U5Z8 902 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 ZSWIM9Q86XI8 627 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 UNC5BQ8IZJ1 945 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 PLCD3Q8N3E9 789 aa15.19■□□□□ 0.02
SREK1-209ENST00000520953 ZNF778Q96MU6 729 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms