RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 TNRC6CQ9HCJ0 1690 aaKnown RBP4.45□□□□□ -1.7
CLK4-207ENST00000520909 PLSCR5A0PG75 271 aa4.45□□□□□ -1.7
CLK4-207ENST00000520909 CXorf65A6NEN9 183 aa4.45□□□□□ -1.7
CLK4-207ENST00000520909 SRRM3A6NNA2 597 aaPredicted RBP4.45□□□□□ -1.7
CLK4-207ENST00000520909 CLCA1A8K7I4 914 aa4.45□□□□□ -1.7
CLK4-207ENST00000520909 SLC16A5O15375 505 aa4.45□□□□□ -1.7
CLK4-207ENST00000520909 RNF113AO15541 343 aaKnown RBP4.45□□□□□ -1.7
CLK4-207ENST00000520909 MSI1O43347 362 aaKnown RBP4.45□□□□□ -1.7
CLK4-207ENST00000520909 IDH1O75874 414 aaKnown RBP4.45□□□□□ -1.7
CLK4-207ENST00000520909 KRT36O76013 467 aa4.45□□□□□ -1.7
CLK4-207ENST00000520909 NEURL1O76050 574 aa4.45□□□□□ -1.7
CLK4-207ENST00000520909 KAT7O95251 611 aa4.45□□□□□ -1.7
CLK4-207ENST00000520909 UMODP07911 640 aa4.45□□□□□ -1.7
CLK4-207ENST00000520909 DPEP1P16444 411 aa4.45□□□□□ -1.7
CLK4-207ENST00000520909 ANP32AP39687 249 aaKnown RBP4.45□□□□□ -1.7
CLK4-207ENST00000520909 SELENOVP59797 346 aa4.45□□□□□ -1.7
CLK4-207ENST00000520909 CHAF1AQ13111 956 aaPredicted RBP4.45□□□□□ -1.7
CLK4-207ENST00000520909 MRGPRG-AS1Q2M3A8 158 aa4.45□□□□□ -1.7
CLK4-207ENST00000520909 TDRD12Q587J7 1177 aaKnown RBP4.45□□□□□ -1.7
CLK4-207ENST00000520909 WBP2NLQ6ICG8 309 aa4.45□□□□□ -1.7
CLK4-207ENST00000520909 WDR93Q6P2C0 686 aa4.45□□□□□ -1.7
CLK4-207ENST00000520909 KIAA0408Q6ZU52 694 aa4.45□□□□□ -1.7
CLK4-207ENST00000520909 CLIP4Q8N3C7 705 aa4.45□□□□□ -1.7
CLK4-207ENST00000520909 ATP11CQ8NB49 1132 aa4.45□□□□□ -1.7
CLK4-207ENST00000520909 TBC1D16Q8TBP0 767 aa4.45□□□□□ -1.7
CLK4-207ENST00000520909 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.45□□□□□ -1.7
CLK4-207ENST00000520909 PNRC2Q9NPJ4 139 aaKnown RBP4.45□□□□□ -1.7
CLK4-207ENST00000520909 PIH1D3Q9NQM4 214 aaKnown RBP4.45□□□□□ -1.7
CLK4-207ENST00000520909 POLLQ9UGP5 575 aa4.45□□□□□ -1.7
CLK4-207ENST00000520909 DDX20Q9UHI6 824 aaKnown RBP4.45□□□□□ -1.7
CLK4-207ENST00000520909 ZMYND8Q9ULU4 1186 aaPredicted RBP4.45□□□□□ -1.7
CLK4-207ENST00000520909 UBE2J1Q9Y385 318 aaPredicted RBP4.45□□□□□ -1.7
CLK4-207ENST00000520909 LRP5O75197 1615 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 LAMB2P55268 1798 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 TAF1P21675 1872 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 LOC102724159A0A0B4J2E5 919 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 A0A0D9SFI3 127 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 OR2W5A6NFC9 320 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 NPC1O15118 1278 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 ZFYP08048 801 aaPredicted RBP4.44□□□□□ -1.7
CLK4-207ENST00000520909 IDEP14735 1019 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 MCCP23508 829 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 POLE2P56282 527 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 DAG1Q14118 895 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 PWP2Q15269 919 aaKnown RBP4.44□□□□□ -1.7
CLK4-207ENST00000520909 KIF19Q2TAC6 998 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 MCMDC2Q4G0Z9 681 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 SLC9C2Q5TAH2 1124 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 ZSCAN25Q6NSZ9 544 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 CCDC129Q6ZRS4 1044 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 C15orf52Q6ZUT6 534 aaKnown RBP4.44□□□□□ -1.7
CLK4-207ENST00000520909 TTC30AQ86WT1 665 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 FAM217AQ8IXS0 508 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 SLC25A41Q8N5S1 370 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 PHKBQ93100 1093 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 POLDIP3Q9BY77 421 aaKnown RBP4.44□□□□□ -1.7
CLK4-207ENST00000520909 NUP62CLQ9H1M0 184 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 IL25Q9H293 177 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 RNF146Q9NTX7 359 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 RAI14Q9P0K7 980 aa4.44□□□□□ -1.7
CLK4-207ENST00000520909 MAGED2Q9UNF1 606 aaPredicted RBP4.44□□□□□ -1.7
CLK4-207ENST00000520909 C10orf71Q711Q0 1435 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 MS4A18H0YCH9 400 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 I6L893 689 aaPredicted RBP4.43□□□□□ -1.7
CLK4-207ENST00000520909 VWA5AO00534 786 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 LIASO43766 372 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 ADD2P35612 726 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 SLC16A2P36021 539 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 DLX5P56178 289 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 SHC2P98077 582 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 SEMA5AQ13591 1074 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 NFE2Q16621 373 aaPredicted RBP4.43□□□□□ -1.7
CLK4-207ENST00000520909 RAP1GAP2Q684P5 730 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 C8orf82Q6P1X6 216 aaPredicted RBP4.43□□□□□ -1.7
CLK4-207ENST00000520909 ZNF367Q7RTV3 350 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 ZNF589Q86UQ0 364 aaPredicted RBP4.43□□□□□ -1.7
CLK4-207ENST00000520909 TICAM2Q86XR7 235 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 MUC20Q8N307 709 aaPredicted RBP4.43□□□□□ -1.7
CLK4-207ENST00000520909 MAGEB6Q8N7X4 407 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 TDRD7Q8NHU6 1098 aaKnown RBP4.43□□□□□ -1.7
CLK4-207ENST00000520909 NPIPB3Q92617 1050 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 WBP2Q969T9 261 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 FAR2Q96K12 515 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 SNX27Q96L92 541 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 SEC62Q99442 399 aaKnown RBP4.43□□□□□ -1.7
CLK4-207ENST00000520909 EYA3Q99504 573 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 LSG1Q9H089 658 aaKnown RBP4.43□□□□□ -1.7
CLK4-207ENST00000520909 PCDHAC1Q9H158 963 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 DDX31Q9H8H2 851 aaKnown RBP4.43□□□□□ -1.7
CLK4-207ENST00000520909 CD209Q9NNX6 404 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 TCF7L2Q9NQB0 619 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 HELLSQ9NRZ9 838 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 RAD50Q92878 1312 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 ZNF532Q9HCE3 1301 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 RFX7Q2KHR2 1363 aa4.43□□□□□ -1.7
CLK4-207ENST00000520909 SPEF2Q9C093 1822 aa4.42□□□□□ -1.7
CLK4-207ENST00000520909 ALDOCP09972 364 aaKnown RBP4.42□□□□□ -1.7
CLK4-207ENST00000520909 SRGAP2BP0DMP2 458 aa4.42□□□□□ -1.7
CLK4-207ENST00000520909 MYL4P12829 197 aa4.42□□□□□ -1.7
CLK4-207ENST00000520909 CHRNB2P17787 502 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms