RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 KIFC3Q9BVG8 833 aa6.32□□□□□ -1.4
PABPC1-216ENST00000520868 C2orf40Q9H1Z8 148 aa6.32□□□□□ -1.4
PABPC1-216ENST00000520868 TMEM60Q9H2L4 133 aa6.32□□□□□ -1.4
PABPC1-216ENST00000520868 BRD9Q9H8M2 597 aa6.32□□□□□ -1.4
PABPC1-216ENST00000520868 KIAA1586Q9HCI6 787 aa6.32□□□□□ -1.4
PABPC1-216ENST00000520868 CFAP97Q9P2B7 532 aa6.32□□□□□ -1.4
PABPC1-216ENST00000520868 MTRRQ9UBK8 725 aa6.32□□□□□ -1.4
PABPC1-216ENST00000520868 ZMYM2Q9UBW7 1377 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 TDRD15B5MCY1 1934 aaKnown RBP6.31□□□□□ -1.4
PABPC1-216ENST00000520868 MTCL1Q9Y4B5 1905 aaKnown RBP6.31□□□□□ -1.4
PABPC1-216ENST00000520868 CACNA1BQ00975 2339 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 CCDC151A5D8V7 595 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 ARHGEF35A5YM69 484 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 SHISA7A6NL88 538 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 PRRG1O14668 218 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 YY2O15391 372 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 PROM1O43490 865 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 EPB41L2O43491 1005 aaKnown RBP6.31□□□□□ -1.4
PABPC1-216ENST00000520868 TRAPPC3O43617 180 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 CHEK2O96017 543 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 POU2F2P09086 479 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 CYP11B2P19099 503 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 MAGEA9P43362 315 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 NAMPTP43490 491 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 ROR1Q01973 937 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 HLXQ14774 488 aaPredicted RBP6.31□□□□□ -1.4
PABPC1-216ENST00000520868 UPP1Q16831 310 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 VWA1Q6PCB0 445 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 MICALCLQ6ZW33 695 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 DIS3L2Q8IYB7 885 aaKnown RBP6.31□□□□□ -1.4
PABPC1-216ENST00000520868 ZNF461Q8TAF7 563 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 TCEAL4Q96EI5 215 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 PPP1R10Q96QC0 940 aaKnown RBP6.31□□□□□ -1.4
PABPC1-216ENST00000520868 SIK2Q9H0K1 926 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 WDCPQ9H6R7 721 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 LMAN1LQ9HAT1 526 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 TUFT1Q9NNX1 390 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 GDE1Q9NZC3 331 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 FOXJ2Q9P0K8 574 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 SLC17A6Q9P2U8 582 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 SLC45A2Q9UMX9 530 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 MRPS17Q9Y2R5 130 aaKnown RBP6.31□□□□□ -1.4
PABPC1-216ENST00000520868 EPG5Q9HCE0 2579 aa6.31□□□□□ -1.4
PABPC1-216ENST00000520868 SMIM28A0A1B0GU29 152 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 WDR27A2RRH5 827 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 TMEM189-UBE2V1I3L0A0 370 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 K7ERI5 159 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 PODXLO00592 558 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 TBC1D4O60343 1298 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 JAK2O60674 1132 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 SUN1O94901 812 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 ABLIM3O94929 683 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 LARGE1O95461 756 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 SEC24AO95486 1093 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 MYL4P12829 197 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 GJA1P17302 382 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 PDCP20941 246 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 GDI1P31150 447 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 VIPR2P41587 438 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 CCR2P41597 374 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 RPS9P46781 194 aaKnown RBP6.3□□□□□ -1.4
PABPC1-216ENST00000520868 CACNA2D1P54289 1103 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 ARHGAP8P85298 464 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 TRIM29Q14134 588 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 ME3Q16798 604 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 DCAF4L1Q3SXM0 396 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 CD300EQ496F6 205 aaPredicted RBP6.3□□□□□ -1.4
PABPC1-216ENST00000520868 FAM78AQ5JUQ0 283 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 CYP4A22Q5TCH4 519 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 ATF7IP2Q5U623 682 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 KIAA0895LQ68EN5 471 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 RTL10Q7L3V2 364 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 ZBTB46Q86UZ6 589 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 ADGRG5Q8IZF4 528 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 ELSPBP1Q96BH3 223 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 IFT74Q96LB3 600 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 UROC1Q96N76 676 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 POLR3CQ9BUI4 534 aaPredicted RBP6.3□□□□□ -1.4
PABPC1-216ENST00000520868 TRMT61BQ9BVS5 477 aaKnown RBP6.3□□□□□ -1.4
PABPC1-216ENST00000520868 ZFP14Q9HCL3 533 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 ZNF334Q9HCZ1 680 aaPredicted RBP6.3□□□□□ -1.4
PABPC1-216ENST00000520868 GMEB2Q9UKD1 530 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 RAB23Q9ULC3 237 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.3□□□□□ -1.4
PABPC1-216ENST00000520868 F5P12259 2224 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 ACACBO00763 2458 aa6.3□□□□□ -1.4
PABPC1-216ENST00000520868 ARHGEF37A1IGU5 675 aa6.29□□□□□ -1.4
PABPC1-216ENST00000520868 CCDC169A6NNP5 214 aa6.29□□□□□ -1.4
PABPC1-216ENST00000520868 H7C4K7 107 aa6.29□□□□□ -1.4
PABPC1-216ENST00000520868 ZNF197O14709 1029 aa6.29□□□□□ -1.4
PABPC1-216ENST00000520868 ZNF263O14978 683 aa6.29□□□□□ -1.4
PABPC1-216ENST00000520868 MPPED1O15442 326 aa6.29□□□□□ -1.4
PABPC1-216ENST00000520868 HARSP12081 509 aaKnown RBP6.29□□□□□ -1.4
PABPC1-216ENST00000520868 FCARP24071 287 aa6.29□□□□□ -1.4
PABPC1-216ENST00000520868 RPA1P27694 616 aa6.29□□□□□ -1.4
PABPC1-216ENST00000520868 CCT6AP40227 531 aaKnown RBP6.29□□□□□ -1.4
PABPC1-216ENST00000520868 PIK3CGP48736 1102 aa6.29□□□□□ -1.4
PABPC1-216ENST00000520868 EFNA5P52803 228 aa6.29□□□□□ -1.4
PABPC1-216ENST00000520868 PEX3P56589 373 aa6.29□□□□□ -1.4
PABPC1-216ENST00000520868 PPP2R5AQ15172 486 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms