RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 ATP8A1Q9Y2Q0 1164 aa11.66□□□□□ -0.54
SPIDR-212ENST00000519661 TMEM110-MUSTN1A8MSY1 372 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 MEI4A8MW99 385 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 APOC4-APOC2K7ER74 178 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 KRIT1O00522 736 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 ARHGAP33O14559 1287 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 KRT86O43790 486 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 ZNF189O75820 626 aaPredicted RBP11.65□□□□□ -0.54
SPIDR-212ENST00000519661 APOC2P02655 101 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 UGT2B4P06133 528 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 TIMP2P16035 220 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 SERPINA4P29622 427 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 ABL2P42684 1182 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 MMP13P45452 471 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 PPP2CBP62714 309 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 PPP2CAP67775 309 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 IRX4P78413 519 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 BNC1Q01954 994 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 SLC14A1Q13336 389 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 XRCC4Q13426 336 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 UGP2Q16851 508 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 TMEM52BQ4KMG9 183 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 SETMARQ53H47 684 aaPredicted RBP11.65□□□□□ -0.54
SPIDR-212ENST00000519661 TRIM61Q5EBN2 209 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.65□□□□□ -0.54
SPIDR-212ENST00000519661 LEKR1Q6ZMV7 388 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 KIAA1328Q86T90 577 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 FAM124AQ86V42 546 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 BBS5Q8N3I7 341 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 DENND6BQ8NEG7 585 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 ARRDC2Q8TBH0 407 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 ERLEC1Q96DZ1 483 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 MCCC1Q96RQ3 725 aaPredicted RBP11.65□□□□□ -0.54
SPIDR-212ENST00000519661 CINPQ9BW66 212 aaPredicted RBP11.65□□□□□ -0.54
SPIDR-212ENST00000519661 POLR1EQ9GZS1 481 aaKnown RBP11.65□□□□□ -0.54
SPIDR-212ENST00000519661 ZDHHC6Q9H6R6 413 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 ERVMER34-1Q9H9K5 563 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 DYRK4Q9NR20 520 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 HAUS2Q9NVX0 235 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 EIF2B4Q9UI10 523 aaKnown RBP11.65□□□□□ -0.54
SPIDR-212ENST00000519661 ZFR2Q9UPR6 939 aaKnown RBP11.65□□□□□ -0.54
SPIDR-212ENST00000519661 HYOU1Q9Y4L1 999 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 SLCO1B1Q9Y6L6 691 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 CAPN6Q9Y6Q1 641 aa11.65□□□□□ -0.54
SPIDR-212ENST00000519661 A0A0U1RQJ8 604 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 PATE3B3GLJ2 98 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 TOR1BO14657 336 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 INSIG1O15503 277 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 DDX3YO15523 660 aaKnown RBP11.64□□□□□ -0.55
SPIDR-212ENST00000519661 MTSS1O43312 755 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 CCDC175P0C221 793 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 CCNB1P14635 433 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 GKP32189 559 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 MMP12P39900 470 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 PI4KAP42356 2102 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 CTSKP43235 329 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 RWDD2BP57060 319 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 RPL26P61254 145 aaKnown RBP11.64□□□□□ -0.55
SPIDR-212ENST00000519661 RPS21P63220 83 aaKnown RBP11.64□□□□□ -0.55
SPIDR-212ENST00000519661 ADCY2Q08462 1091 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 ELP6Q0PNE2 266 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 KLF1Q13351 362 aaPredicted RBP11.64□□□□□ -0.55
SPIDR-212ENST00000519661 ZNF235Q14590 738 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 IHHQ14623 411 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 SF3A2Q15428 464 aaKnown RBP11.64□□□□□ -0.55
SPIDR-212ENST00000519661 TCEAL6Q6IPX3 200 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 FBXL19Q6PCT2 694 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 IL27RAQ6UWB1 636 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 ABI3BPQ7Z7G0 1075 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 ZSWIM9Q86XI8 627 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 ZNF354CQ86Y25 554 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 CCDC13Q8IYE1 715 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 CNTD1Q8N815 330 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 MFSD2AQ8NA29 543 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 NSMCE1Q8WV22 266 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 TCEAL3Q969E4 200 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 ZNF830Q96NB3 372 aaPredicted RBP11.64□□□□□ -0.55
SPIDR-212ENST00000519661 KLHL32Q96NJ5 620 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 VAT1Q99536 393 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 KLF6Q99612 283 aaPredicted RBP11.64□□□□□ -0.55
SPIDR-212ENST00000519661 RTKNQ9BST9 563 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 NUSAP1Q9BXS6 441 aaKnown RBP11.64□□□□□ -0.55
SPIDR-212ENST00000519661 RXFP3Q9NSD7 469 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 RPL26L1Q9UNX3 145 aaKnown RBP11.64□□□□□ -0.55
SPIDR-212ENST00000519661 PCDHGB2Q9Y5G2 931 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.64□□□□□ -0.55
SPIDR-212ENST00000519661 CEP192Q8TEP8 1941 aa11.64□□□□□ -0.55
SPIDR-212ENST00000519661 TBC1D3DA0A087WVF3 549 aa11.63□□□□□ -0.55
SPIDR-212ENST00000519661 TBC1D3IA0A087WXS9 549 aa11.63□□□□□ -0.55
SPIDR-212ENST00000519661 TBC1D3EA0A087X179 549 aa11.63□□□□□ -0.55
SPIDR-212ENST00000519661 TBC1D3KA0A087X1G2 549 aa11.63□□□□□ -0.55
SPIDR-212ENST00000519661 A0A1W2PQU0 124 aa11.63□□□□□ -0.55
SPIDR-212ENST00000519661 TBC1D3FA6NER0 549 aaPredicted RBP11.63□□□□□ -0.55
SPIDR-212ENST00000519661 HACD1B0YJ81 288 aa11.63□□□□□ -0.55
SPIDR-212ENST00000519661 TBC1D3LB9A6J9 549 aa11.63□□□□□ -0.55
SPIDR-212ENST00000519661 PRAMEF26H0Y7S4 382 aa11.63□□□□□ -0.55
SPIDR-212ENST00000519661 PLK4O00444 970 aa11.63□□□□□ -0.55
SPIDR-212ENST00000519661 RIOK3O14730 519 aaKnown RBP11.63□□□□□ -0.55
SPIDR-212ENST00000519661 PPP1R12AO14974 1030 aaPredicted RBP11.63□□□□□ -0.55
SPIDR-212ENST00000519661 DFNA5O60443 496 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms