RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 PTPRQQ9UMZ3 2332 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 RP1P56715 2156 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 ANKRD62A6NC57 917 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 IGSF6O95976 241 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 GP1BAP07359 652 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 CCDC172P0C7W6 258 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 ALPPL2P10696 532 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 JUNDP17535 347 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 TNFAIP3P21580 790 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 ITPKBP27987 946 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 RHOAP61586 193 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 PLEKHA7Q6IQ23 1121 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 DCUN1D2Q6PH85 259 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 ZNF354CQ86Y25 554 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 AOPEPQ8N6M6 819 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 HCAR2Q8TDS4 363 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 BBC3Q96PG8 261 aaPredicted RBP12.59□□□□□ -0.39
CSMD1-205ENST00000519623 PDFQ9HBH1 243 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 USP29Q9HBJ7 922 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 RTN4Q9NQC3 1192 aaKnown RBP12.59□□□□□ -0.39
CSMD1-205ENST00000519623 MBNL1Q9NR56 388 aaKnown RBP12.59□□□□□ -0.39
CSMD1-205ENST00000519623 MYO6Q9UM54 1294 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 LRRK1Q38SD2 2015 aa12.59□□□□□ -0.39
CSMD1-205ENST00000519623 LOC400499M0QZD8 3231 aa12.58□□□□□ -0.39
CSMD1-205ENST00000519623 SHROOM3Q8TF72 1996 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 J3KR12 359 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 TPP1O14773 563 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 FGF10O15520 208 aaPredicted RBP12.58□□□□□ -0.4
CSMD1-205ENST00000519623 AQP9O43315 295 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 BRINP1O60477 761 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 BUB1BO60566 1050 aaPredicted RBP12.58□□□□□ -0.4
CSMD1-205ENST00000519623 GCATO75600 419 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 TM7SF2O76062 418 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 HTR7P34969 479 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 IGFALSP35858 605 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 DUSP3P51452 185 aaPredicted RBP12.58□□□□□ -0.4
CSMD1-205ENST00000519623 YPEL5P62699 121 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 TYRO3Q06418 890 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 CA9Q16790 459 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 TMEM52BQ4KMG9 183 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 CCDC183Q5T5S1 534 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 ZCCHC8Q6NZY4 707 aaKnown RBP12.58□□□□□ -0.4
CSMD1-205ENST00000519623 VPS36Q86VN1 386 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 TP53I13Q8NBR0 393 aaPredicted RBP12.58□□□□□ -0.4
CSMD1-205ENST00000519623 SNIP1Q8TAD8 396 aaKnown RBP12.58□□□□□ -0.4
CSMD1-205ENST00000519623 LMX1AQ8TE12 382 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 FGF11Q92914 225 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 TCEAL2Q9H3H9 227 aaPredicted RBP12.58□□□□□ -0.4
CSMD1-205ENST00000519623 SUV39H2Q9H5I1 410 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 PARVAQ9NVD7 372 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 GPATCH2LQ9NWQ4 482 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 TMEM63CQ9P1W3 806 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 SALL4Q9UJQ4 1053 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 PCDHB1Q9Y5F3 818 aa12.58□□□□□ -0.4
CSMD1-205ENST00000519623 TSPAN11A1L157 253 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 TMEM191CA6NGB0 347 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 TMCO5BA8MYB1 307 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 GOLGA6L22H0YM25 854 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 H3BM21 787 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 TOR1BO14657 336 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 PRAMEF11O60813 436 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 PIGNO95427 931 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 EIF4A3P38919 411 aaKnown RBP12.57□□□□□ -0.4
CSMD1-205ENST00000519623 ABCG1P45844 678 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 SUOXP51687 545 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 NDST2P52849 883 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 TPI1P60174 286 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 PTK2BQ14289 1009 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 UGP2Q16851 508 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 KLHL40Q2TBA0 621 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 DEFB133Q30KQ1 61 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 ANO6Q4KMQ2 910 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 ERMARDQ5T6L9 678 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 DNAAF5Q86Y56 855 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 RBFAQ8N0V3 343 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 IFI44Q8TCB0 444 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 CXorf40AQ8TE69 158 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 BTN2A2Q8WVV5 523 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 CELF6Q96J87 481 aaKnown RBP12.57□□□□□ -0.4
CSMD1-205ENST00000519623 EXOC2Q96KP1 924 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 PEBP4Q96S96 227 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 WRAP53Q9BUR4 548 aaKnown RBP12.57□□□□□ -0.4
CSMD1-205ENST00000519623 SLC39A8Q9C0K1 460 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 AIPL1Q9NZN9 384 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 UBA2Q9UBT2 640 aaPredicted RBP12.57□□□□□ -0.4
CSMD1-205ENST00000519623 AP4E1Q9UPM8 1137 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 RAI2Q9Y5P3 530 aa12.57□□□□□ -0.4
CSMD1-205ENST00000519623 SMG1Q96Q15 3661 aaKnown RBP12.56□□□□□ -0.4
CSMD1-205ENST00000519623 EME2A4GXA9 379 aaPredicted RBP12.56□□□□□ -0.4
CSMD1-205ENST00000519623 LRRC53A6NM62 1247 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 EIF3CLB5ME19 914 aaKnown RBP12.56□□□□□ -0.4
CSMD1-205ENST00000519623 RIOK3O14730 519 aaKnown RBP12.56□□□□□ -0.4
CSMD1-205ENST00000519623 ATMINO43313 823 aaPredicted RBP12.56□□□□□ -0.4
CSMD1-205ENST00000519623 LZTS3O60299 673 aaPredicted RBP12.56□□□□□ -0.4
CSMD1-205ENST00000519623 MBD3O95983 291 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 FTLP02792 175 aaPredicted RBP12.56□□□□□ -0.4
CSMD1-205ENST00000519623 GZMAP12544 262 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 TGM2P21980 687 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 PSMA2P25787 234 aa12.56□□□□□ -0.4
CSMD1-205ENST00000519623 ACTN2P35609 894 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms